RNA–Protein interactions for RNA: ENST00000295797.4

PRKCI-201, Transcript of protein kinase C iota, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCI, Length 4,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-201ENST00000295797 CSNK2A1P68400 391 aaPredicted RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 COX20Q5RI15 118 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 C6orf132Q5T0Z8 1188 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 CSNK2A3Q8NEV1 391 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 METTL2AQ96IZ6 378 aaKnown RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 OR2M4Q96R27 311 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 FN3KQ9H479 309 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 TLR9Q9NR96 1032 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 USP36Q9P275 1121 aaKnown RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 SLC7A11Q9UPY5 501 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 ARID1BQ8NFD5 2236 aaPredicted RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 PEX14O75381 377 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 GAAP10253 952 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 TAS2R31P59538 309 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 GALK2Q01415 458 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 LINC00299Q6ZSB3 139 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 GLYATL2Q8WU03 294 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 SLC35B4Q969S0 331 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 PTCHD1Q96NR3 888 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 ABI3Q9P2A4 366 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 MYEF2Q9P2K5 600 aaKnown RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 MEIS3P1A6NDR6 274 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 ZNF705FA8MVS1 300 aaPredicted RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 TGM5O43548 720 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 B3GALT4O96024 378 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 ZNF705DP0CH99 300 aaPredicted RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 ZNF705BP0CI00 300 aaPredicted RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 RAB6AP20340 208 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 TMEM156Q8N614 296 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 TMEM163Q8TC26 289 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 HOXB13Q92826 284 aaPredicted RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 ZBTB8AQ96BR9 441 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 MMABQ96EY8 250 aaPredicted RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 ZNF587Q96SQ5 575 aaPredicted RBP17.53■□□□□ 0.4
PRKCI-201ENST00000295797 V9GY05 133 aa17.53■□□□□ 0.4
PRKCI-201ENST00000295797 CASC3O15234 703 aaKnown RBP17.52■□□□□ 0.4
PRKCI-201ENST00000295797 MMP2P08253 660 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 CYBAP13498 195 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 RPS25P62851 125 aaKnown RBP17.52■□□□□ 0.4
PRKCI-201ENST00000295797 IL13RA1P78552 427 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 RAB33AQ14088 237 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 FIP1L1Q6UN15 594 aaKnown RBP17.52■□□□□ 0.4
PRKCI-201ENST00000295797 B3GLCTQ6Y288 498 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 PINK1Q9BXM7 581 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 C11orf54Q9H0W9 315 aaPredicted RBP17.52■□□□□ 0.4
PRKCI-201ENST00000295797 TUBG2Q9NRH3 451 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 KLHL42Q9P2K6 505 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 OSGIN1Q9UJX0 560 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 TARM1B6A8C7 271 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 GABRPO00591 440 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 SCO2O43819 266 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 ACP2P11117 423 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 HOXB2P14652 356 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 SYN1P17600 705 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 PGFP49763 221 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 RPS27AP62979 156 aaKnown RBP17.52■□□□□ 0.4
PRKCI-201ENST00000295797 UBA52P62987 128 aaKnown RBP17.52■□□□□ 0.4
PRKCI-201ENST00000295797 CXADRP78310 365 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 ARL6IP1Q15041 203 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 APOOLQ6UXV4 268 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.52■□□□□ 0.42e-11■■□□□ 11.7
PRKCI-201ENST00000295797 ZNF416Q9BWM5 594 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 NPIPA5A0A0B4J1W7 369 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 A0A1B0GTL3 188 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 NPIPA7E9PJI5 369 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 SLC43A1O75387 559 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 CLEC2LP0C7M8 214 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 NPIPA8P0DM63 369 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 RBMS1P29558 406 aaKnown RBP17.52■□□□□ 0.4
PRKCI-201ENST00000295797 POU3F4P49335 361 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 BATFQ16520 125 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 AWAT2Q6E213 333 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 LCN10Q6JVE6 187 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 ZNF440Q8IYI8 595 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 ZNF454Q8N9F8 522 aa17.52■□□□□ 0.4
PRKCI-201ENST00000295797 FCN2Q15485 313 aa17.52■□□□□ 0.39
PRKCI-201ENST00000295797 TSSK4Q6SA08 328 aa17.52■□□□□ 0.39
PRKCI-201ENST00000295797 RAB7BQ96AH8 199 aa17.52■□□□□ 0.39
PRKCI-201ENST00000295797 HRH4Q9H3N8 390 aa17.52■□□□□ 0.39
PRKCI-201ENST00000295797 ZNF442Q9H7R0 627 aa17.52■□□□□ 0.39
PRKCI-201ENST00000295797 KCNS2Q9ULS6 477 aa17.52■□□□□ 0.39
PRKCI-201ENST00000295797 RFXAPO00287 272 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 ARL3P36405 182 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 TAGLNQ01995 201 aaKnown RBP17.51■□□□□ 0.39
PRKCI-201ENST00000295797 GGTA1PQ4G0N0 100 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 TPRA1Q86W33 373 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 CLDN22Q8N7P3 220 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 ZNF419Q96HQ0 510 aaPredicted RBP17.51■□□□□ 0.39
PRKCI-201ENST00000295797 TXNL4BQ9NX01 149 aaKnown RBP17.51■□□□□ 0.39
PRKCI-201ENST00000295797 TCRBV5S2A0A599 114 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 GAPDHSO14556 408 aaPredicted RBP17.51■□□□□ 0.39
PRKCI-201ENST00000295797 PIP5K1CO60331 668 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 SCG5P05408 212 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 LIPCP11150 499 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 ENDOUP21128 410 aaKnown RBP17.51■□□□□ 0.39
PRKCI-201ENST00000295797 PSMB10P40306 273 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 BEX5Q5H9J7 111 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 VRK3Q8IV63 474 aa17.51■□□□□ 0.39
PRKCI-201ENST00000295797 C12orf76Q8N812 135 aaPredicted RBP17.51■□□□□ 0.39
PRKCI-201ENST00000295797 C4orf36Q96KX1 117 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms