RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TSPEARQ8WU66 669 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 PHF10Q8WUB8 498 aaKnown RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 TMEM234Q8WY98 164 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 WDYHV1Q96HA8 205 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ANKRD27Q96NW4 1050 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 SH3GL1Q99961 368 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 TREX2Q9BQ50 279 aaPredicted RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 ECSITQ9BQ95 431 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 TUBA1CQ9BQE3 449 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 TTYH2Q9BSA4 534 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 PINK1Q9BXM7 581 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 PRRG4Q9BZD6 226 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 PRDM14Q9GZV8 571 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 IKZF5Q9H5V7 419 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 MTHFD2LQ9H903 347 aaPredicted RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 A4GALTQ9NPC4 353 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 SLC52A3Q9NQ40 469 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 GID8Q9NWU2 228 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ICAM5Q9UMF0 924 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ZNF232Q9UNY5 417 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ZNF443Q9Y2A4 671 aaPredicted RBP5.91□□□□□ -1.46
CD44-204ENST00000279452 ZNF337Q9Y3M9 751 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 FAM215AQ9Y5M1 114 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 ZNF462Q96JM2 2506 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 COL6A6A6NMZ7 2263 aa5.91□□□□□ -1.46
CD44-204ENST00000279452 TRBV5-3A0A0A0MS03 114 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 CFAP73A6NFT4 308 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 SLC22A20A6NK97 555 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 GJE1A6NN92 205 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 AHRRA9YTQ3 701 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 KDM4EB2RXH2 506 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 H0YC42 278 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 LINC01387J3KSC0 135 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 AP3D1O14617 1153 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 TNFSF11O14788 317 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 SLC22A2O15244 555 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 BCAS1O75363 584 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 DCTN3O75935 186 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 SYNGR4O95473 234 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 PLGP00747 810 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 IL2RAP01589 272 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 OPN1SWP03999 348 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 HOXD4P09016 255 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 LINGO3P0C6S8 592 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 PABPC4LP0CB38 370 aaKnown RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 GKN3PP0CG01 181 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 GLI4P10075 376 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 ARAFP10398 606 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 TFPIP10646 304 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 COX4I1P13073 169 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 GP1BBP13224 206 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 NID1P14543 1247 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 ZNF708P17019 499 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 ZNF17P17021 662 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 PRKCAP17252 672 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 HOXB9P17482 250 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 BMP5P22003 454 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 ADSLP30566 484 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 SLC7A1P30825 629 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 PGM1P36871 562 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 EIF1P41567 113 aaKnown RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 SLC6A8P48029 635 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 CPA2P48052 419 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 IDH2P48735 452 aaKnown RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 LHX2P50458 406 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 TPD52P55327 224 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 CLDN15P56746 228 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 CLDN18P56856 261 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 CLDN20P56880 219 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 B3GALT5-AS1P59052 145 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 COPZ1P61923 177 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 MXRA7P84157 204 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 GLYR1Q49A26 553 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 RABL3Q5HYI8 236 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 COQ5Q5HYK3 327 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 PDSS1Q5T2R2 415 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 GKAP1Q5VSY0 366 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 REEP3Q6NUK4 255 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 XKRXQ6PP77 449 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 ARMC8Q8IUR7 673 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 MCEMP1Q8IX19 187 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 CMIPQ8IY22 773 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 GCNT2Q8N0V5 402 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 LILRA2Q8N149 483 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 C10orf111Q8N326 155 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 GTPBP8Q8N3Z3 284 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 MARVELD2Q8N4S9 558 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 ZNF808Q8N4W9 903 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 HIPK4Q8NE63 616 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 TNIP2Q8NFZ5 429 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 OR10A6Q8NH74 314 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 RP9Q8TA86 221 aaKnown RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 GPR119Q8TDV5 335 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 SLC26A7Q8TE54 656 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 ITLN2Q8WWU7 325 aaPredicted RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 ASB5Q8WWX0 329 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 OIT3Q8WWZ8 545 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 CNOT9Q92600 299 aaKnown RBP5.9□□□□□ -1.46
CD44-204ENST00000279452 NTNG2Q96CW9 530 aa5.9□□□□□ -1.46
CD44-204ENST00000279452 LRRC58Q96CX6 371 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms