RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 ZNF443Q9Y2A4 671 aaPredicted RBP25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 ZNF451Q9Y4E5 1061 aa25.2■■□□□ 1.63
SMARCD3-201ENST00000262188 TCRBV3S1A0A5B6 114 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 C2orf72A6NCS6 295 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 OR6C70A6NIJ9 312 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 RPS4Y1P22090 263 aaKnown RBP25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 PNLIPRP2P54317 469 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 ATP12AP54707 1039 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 MEP1AQ16819 746 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 ZNF791Q3KP31 576 aaPredicted RBP25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 EIF3MQ7L2H7 374 aaKnown RBP25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 CLVS1Q8IUQ0 354 aaPredicted RBP25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 FDCSPQ8NFU4 85 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 ZCCHC14Q8WYQ9 949 aaKnown RBP25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 HGDQ93099 445 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 SLCO4A1Q96BD0 722 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 POLE3Q9NRF9 147 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 AURKCQ9UQB9 309 aa25.2■■□□□ 1.62
SMARCD3-201ENST00000262188 NINQ8N4C6 2090 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 PRAMEF25A6NGN4 478 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 SUV39H1O43463 412 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 PDE9AO76083 593 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 S100A5P33763 92 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 PSMD4P55036 377 aaKnown RBP25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 SELENOWP63302 87 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 ADGRG5Q8IZF4 528 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 RASSF5Q8WWW0 418 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 RIMS3Q9UJD0 308 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 PCDHGA10Q9Y5H3 936 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 ANKRD11Q6UB99 2663 aaPredicted RBP25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 CNTRLQ7Z7A1 2325 aa25.19■■□□□ 1.62
SMARCD3-201ENST00000262188 SCO2O43819 266 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 SF3B4Q15427 424 aaKnown RBP eCLIP25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 CD226Q15762 336 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 MARCH3Q86UD3 253 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 LACC1Q8IV20 430 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 OR4D11Q8NGI4 311 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 GRHL3Q8TE85 626 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 ZNF354BQ96LW1 612 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 GALNT9Q9HCQ5 603 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 UBQLN4Q9NRR5 601 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 ADPRHL2Q9NX46 363 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 AQP12BA6NM10 295 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 KCNJ5P48544 419 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 BMXP51813 675 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 RHDQ02161 417 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 NTRK2Q16620 822 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 ABHD17BQ5VST6 288 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 FKBP9P1Q75LS8 142 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 MDGA2Q7Z553 956 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 RBM45Q8IUH3 476 aaKnown RBP25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 AQP12AQ8IXF9 295 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 TMIGD2Q96BF3 282 aa25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 ZNF552Q9H707 407 aaPredicted RBP25.18■■□□□ 1.62
SMARCD3-201ENST00000262188 ZZEF1O43149 2961 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 EML6Q6ZMW3 1958 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 DHRS12A0PJE2 317 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 GMFGO60234 142 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 HOXC5Q00444 222 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 ZNF141Q15928 474 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 MRPL2Q5T653 305 aaKnown RBP25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 IRAK1BP1Q5VVH5 260 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 LRRC69Q6ZNQ3 347 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 CARM1Q86X55 608 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 GALNT4Q8N4A0 578 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 SLC15A4Q8N697 577 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 POGLUT1Q8NBL1 392 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 OR52E4Q8NGH9 312 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 VANGL1Q8TAA9 524 aaPredicted RBP25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 PYURFQ96I23 114 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 DOHHQ9BU89 302 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 RPS6KA6Q9UK32 745 aa25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 SAMD4AQ9UPU9 718 aaKnown RBP25.17■■□□□ 1.62
SMARCD3-201ENST00000262188 G3V3Y1 287 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 M0R3H8 397 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 OIP5O43482 229 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 HS6ST1O60243 411 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 DBIP07108 87 aaKnown RBP25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 EVI2BP34910 448 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 EEF1A1P68104 462 aaKnown RBP25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 KCNJ10P78508 379 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 TUBA3CQ13748 450 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 KLHL26Q53HC5 615 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 PRAMEF20Q5VT98 475 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 OPN5Q6U736 354 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 CNOT9Q92600 299 aaKnown RBP25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 KLHDC3Q9BQ90 382 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 PRR14Q9BWN1 585 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 C12orf10Q9HB07 376 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 OLAHQ9NV23 265 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 HPF1Q9NWY4 346 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 CPAMD8Q8IZJ3 1885 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 FADS1O60427 444 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 WDPCPO95876 746 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 HPGDP15428 266 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 TBXA2RP21731 343 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 OC90Q02509 493 aaPredicted RBP25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 BROXQ5VW32 411 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 ZNF227Q86WZ6 799 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 SLC47A1Q96FL8 570 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms