RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PLEKHM1Q9Y4G2 1056 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 NUBP2Q9Y5Y2 271 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 A0A0A6YYC8 382 aaPredicted RBP13.44□□□□□ -0.26
CUX2-201ENST00000261726 A6NHS1 94 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 I3L1I5 382 aaPredicted RBP13.44□□□□□ -0.26
CUX2-201ENST00000261726 NUPL2O15504 423 aaKnown RBP13.44□□□□□ -0.26
CUX2-201ENST00000261726 AP1G1O43747 822 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 GLO1Q04760 184 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 SMIM15Q7Z3B0 74 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 CDS1Q92903 461 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 SLC2A13Q96QE2 648 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 PCDHA9Q9Y5H5 950 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 A0A0U1RQS6 177 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 TSPAN11A1L157 253 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 IL13RA1P78552 427 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 GAB1Q13480 694 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 STEAP3Q658P3 488 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 HHIPQ96QV1 700 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 B4DXG7 233 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 IMPA2O14732 288 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 PTGER4P35408 488 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 EFNA3P52797 238 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 OR5D14Q8NGL3 314 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 CHFRQ96EP1 664 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 NUDT22Q9BRQ3 303 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 HRH4Q9H3N8 390 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 HOXB5P09067 269 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 TPT1P13693 172 aaKnown RBP13.44□□□□□ -0.26
CUX2-201ENST00000261726 HOXC5Q00444 222 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 RING1Q06587 406 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 CAMK2DQ13557 499 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 ARL6IP1Q15041 203 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 NR0B2Q15466 257 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 UMODL1-AS1Q8N2C9 162 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 NICN1Q9BSH3 213 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 TXNL1O43396 289 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 SNAI1O95863 264 aaPredicted RBP13.44□□□□□ -0.26
CUX2-201ENST00000261726 ITGB2P05107 769 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 RPS5P46782 204 aaKnown RBP13.44□□□□□ -0.26
CUX2-201ENST00000261726 EMP2P54851 167 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 SPOCK1Q08629 439 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 TSPYL5Q86VY4 417 aaPredicted RBP13.44□□□□□ -0.26
CUX2-201ENST00000261726 DNAJC22Q8N4W6 341 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 DMBX1Q8NFW5 382 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 MFFQ9GZY8 342 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 ENPP4Q9Y6X5 453 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 TRAV27A0A087WT01 109 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 TRBV11-1A0A0K0K1C0 115 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 A0A1W2PS29 197 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 OR52A4PA6NMU1 304 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 P2RY2P41231 377 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 SLC6A8P48029 635 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 TDGQ13569 410 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 HNF4GQ14541 408 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 TMEM239Q8WW34 195 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 PELI2Q9HAT8 420 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 ACTR10Q9NZ32 417 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 DNAJC15Q9Y5T4 150 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 HSPE1-MOB4S4R3N1 261 aa13.44□□□□□ -0.26
CUX2-201ENST00000261726 DNAJB6O75190 326 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 C7P10643 843 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 NPBWR1P48145 328 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 HTR6P50406 440 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 RDH10Q8IZV5 341 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 FNDC8Q8TC99 324 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 INTS14Q96SY0 518 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 NMNAT2Q9BZQ4 307 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 SLC6A16Q9GZN6 736 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 SLC38A1Q9H2H9 487 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 NFS1Q9Y697 457 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 SERTAD2Q14140 314 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 GDPD1Q8N9F7 314 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 OR52R1Q8NGF1 315 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 GTF2H4Q92759 462 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 C4orf36Q96KX1 117 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 ZNF778Q96MU6 729 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 LOC105369274A0A096LPK9 316 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 SOCS6O14544 535 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 HPGDSO60760 199 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 SLC2A1P11166 492 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 PTAFRP25105 342 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 CLDN2P57739 230 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 CXCR4P61073 352 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 SOX4Q06945 474 aaPredicted RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 MZT1Q08AG7 82 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 Q6ZSR6 202 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 KIAA0907Q7Z7F0 614 aaPredicted RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 OR4N4Q8N0Y3 316 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 ZNF417Q8TAU3 575 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 ZNF845Q96IR2 970 aaPredicted RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 BIRC8Q96P09 236 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 SIDT1Q9NXL6 827 aaKnown RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 SLC6A14Q9UN76 642 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 SIPA1L3O60292 1781 aaPredicted RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 CRYBG1Q9Y4K1 1723 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 OR6C65A6NJZ3 312 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 TRAPPC2LH3BP13 241 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 HOXA1P49639 335 aaPredicted RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 SF3B4Q15427 424 aaKnown RBP eCLIP13.43□□□□□ -0.26
CUX2-201ENST00000261726 SLC35G1Q2M3R5 365 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms