RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 UNQ6126/PRO20091Q6UXV3 157 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 DBX2Q6ZNG2 339 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 PRSS42Q7Z5A4 293 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 CLECL1Q8IZS7 167 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 OR4K14Q8NGD5 310 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 SFXN5Q8TD22 340 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 DHRS4Q9BTZ2 278 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 SLC25A32Q9H2D1 315 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 C4BP0C0L5 1744 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 TRPM3Q9HCF6 1732 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 A0A1W2PPV4 95 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 RNF212BA8MTL3 300 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 PPP5D1E7EU14 171 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 FDXRP22570 491 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 CBLP22681 906 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 CSKP41240 450 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 SLC1A3P43003 542 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 HNRNPKP61978 463 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 ETFRF1Q6IPR1 90 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 NUP43Q8NFH3 380 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 SAMD8Q96LT4 415 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 NECTIN4Q96NY8 510 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 NEURL2Q9BR09 285 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 BCO2Q9BYV7 579 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 YY2O15391 372 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 BRINP1O60477 761 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBX18O95935 607 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 CSTAP01040 98 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 EPHX1P07099 455 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 C1GALT1C1LP0DN25 315 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 GNSP15586 552 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 G0S2P27469 103 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 LARP4Q71RC2 724 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 MOB1BQ7L9L4 216 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 SLC35F3Q8IY50 421 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 ARL14EPQ8N8R7 260 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 PGAM5Q96HS1 289 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 SEC22AQ96IW7 307 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 C16orf70Q9BSU1 422 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 SORBS1Q9BX66 1292 aaKnown RBP12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 TOLLIPQ9H0E2 274 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 OPA3Q9H6K4 179 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 GABRQQ9UN88 632 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 GAB2Q9UQC2 676 aa12.4□□□□□ -0.42
PCDHGA3-201ENST00000253812 C11orf98E9PRG8 122 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 PHOX2AO14813 284 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 LDB2O43679 373 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 TOX4O94842 621 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 CLDN7O95471 211 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 AK1P00568 194 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 GIPP09681 153 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 FAM163BP0C2L3 166 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 CLDN6P56747 220 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 SEC61A1P61619 476 aaKnown RBP12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 FOXB2Q5VYV0 432 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 FRMD1Q8N878 549 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 PTCHD1Q96NR3 888 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 CERS4Q9HA82 394 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 DCDC2BA2VCK2 349 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 GPRIN2O60269 458 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 OR2C1O95371 312 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 MPIG6BO95866 241 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 ACP2P11117 423 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 ELK1P19419 428 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 THBS2P35442 1172 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 SEMG2Q02383 582 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 CAMK2DQ13557 499 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 PDZD11Q5EBL8 140 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 SMYD5Q6GMV2 418 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 TMPRSS9Q7Z410 1059 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 RP1L1Q8IWN7 2480 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 OR6M1Q8NGM8 313 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 ECHDC3Q96DC8 303 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 JSRP1Q96MG2 331 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 CSNK1G3Q9Y6M4 447 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 ANKRD12Q6UB98 2062 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 MEIS3P1A6NDR6 274 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 POP7O75817 140 aaKnown RBP12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 PAX6P26367 422 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 IMPA1P29218 277 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 PSMD8P48556 350 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 FXYD4P59646 89 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 OR2B8PP59922 312 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 TLE1Q04724 770 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 AANATQ16613 207 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 UBE2NLQ5JXB2 153 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 NAGSQ8N159 534 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 IL17RCQ8NAC3 791 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 GLOD5A6NK44 160 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 F10P00742 488 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 LAMP1P11279 417 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 ZNF44P15621 663 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 ZNF30P17039 623 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 HTR6P50406 440 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 RAP1AP62834 184 aa12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 EBPQ15125 230 aaKnown RBP12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 ZNF239Q16600 458 aaKnown RBP12.39□□□□□ -0.43
PCDHGA3-201ENST00000253812 LPCAT3Q6P1A2 487 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms