RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SH3D21A4FU49 640 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 SAGE2PA6NJ88 616 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 IDSB3KWA1 339 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 J3KTA2 159 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 J3QKU1 62 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 MEN1O00255 615 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 SEMA7AO75326 666 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 ALOX12BO75342 701 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 HEXBP07686 556 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 SMIM18P0DKX4 95 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 NAGAP17050 411 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 KRT20P35900 424 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 STAT5AP42229 794 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 PNLIPRP2P54317 469 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 RPP38P78345 283 aaKnown RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 NFATC3Q12968 1075 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 PIN1Q13526 163 aaPredicted RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 ERV3-1Q14264 604 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 GANABQ14697 944 aaKnown RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 NPTX1Q15818 432 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 MRPL14Q6P1L8 145 aaKnown RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 TMEM205Q6UW68 189 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 NPSR1Q6W5P4 371 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 ZNF517Q6ZMY9 492 aaPredicted RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 BCORP1Q8N888 145 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 B3GNT7Q8NFL0 401 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 OR4K5Q8NGD3 323 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 OR4D11Q8NGI4 311 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 OR5L2Q8NGL0 311 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 OR52J3Q8NH60 311 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 PIGXQ8TBF5 258 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 GNPDA2Q8TDQ7 276 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 ADIPOR1Q96A54 375 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 TUBA1CQ9BQE3 449 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 RSPO3Q9BXY4 272 aaPredicted RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 ITPAQ9BY32 194 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 GPN2Q9H9Y4 310 aaPredicted RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 TMEM27Q9HBJ8 222 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 SLC22A11Q9NSA0 550 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 MAN2C1Q9NTJ4 1040 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 PLCXD1Q9NUJ7 323 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 SCN3BQ9NY72 215 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 GPN3Q9UHW5 284 aaPredicted RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 CHST2Q9Y4C5 530 aa12.15□□□□□ -0.46
SLIRP-201ENST00000238688 MRPS18BQ9Y676 258 aaKnown RBP12.15□□□□□ -0.46
SLIRP-201ENST00000238688 EXPH5Q8NEV8 1989 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ASH1LQ9NR48 2969 aaKnown RBP12.14□□□□□ -0.47
SLIRP-201ENST00000238688 A0A1W2PQ72 361 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 GXYLT2A0PJZ3 443 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ZAR1LA6NP61 321 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ZNF891A8MT65 544 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-201ENST00000238688 TBXA2RP21731 343 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 CRHBPP24387 322 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 FPR3P25089 353 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 YAP1P46937 504 aaKnown RBP12.14□□□□□ -0.47
SLIRP-201ENST00000238688 SLC6A8P48029 635 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ZNF136P52737 540 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 CRISP1P54107 249 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 EMP2P54851 167 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 NRG3P56975 720 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 TSPAN31Q12999 210 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 EFR3AQ14156 821 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 EBPQ15125 230 aaKnown RBP12.14□□□□□ -0.47
SLIRP-201ENST00000238688 TMEM44Q2T9K0 475 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 VWA2Q5GFL6 755 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ATP1A1-AS1Q5TC04 95 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 PGBD2Q6P3X8 592 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 PODNL1Q6PEZ8 512 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 FIGNL1Q6PIW4 674 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ZNF773Q6PK81 442 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 MBOAT2Q6ZWT7 520 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 NUP54Q7Z3B4 507 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 LACC1Q8IV20 430 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 MISPQ8IVT2 679 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 SLC34A3Q8N130 599 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 CLIP4Q8N3C7 705 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ZNF441Q8N8Z8 693 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 GALNT6Q8NCL4 622 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 SIMC1Q8NDZ2 872 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 FAM71CQ8NEG0 241 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-201ENST00000238688 DNAJA4Q8WW22 397 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-201ENST00000238688 TSLPQ969D9 159 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ZG16BQ96DA0 208 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 VMP1Q96GC9 406 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 SLC41A3Q96GZ6 507 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 Q96MT0 163 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 LPAR4Q99677 370 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 BARD1Q99728 777 aaKnown RBP12.14□□□□□ -0.47
SLIRP-201ENST00000238688 ARHGAP9Q9BRR9 750 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 OR8D2Q9GZM6 311 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 AKIRIN1Q9H9L7 192 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-201ENST00000238688 C12orf10Q9HB07 376 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 CTSFQ9UBX1 484 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 PCDHGB1Q9Y5G3 927 aa12.14□□□□□ -0.47
SLIRP-201ENST00000238688 TNRC6AQ8NDV7 1962 aaKnown RBP12.14□□□□□ -0.47
SLIRP-201ENST00000238688 LOC102723996A0A087X1L8 192 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 SERINC4A6NH21 518 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 M0R3G1 203 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 SCDO00767 359 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms