RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TIPARPQ7Z3E1 657 aaKnown RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 LSRQ86X29 649 aaPredicted RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF440Q8IYI8 595 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 RNF113BQ8IZP6 322 aaKnown RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 GATSQ8NAP1 163 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 RHOXF1Q8NHV9 184 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 FAM46AQ96IP4 442 aaKnown RBP13.97□□□□□ -0.17
HDHD3-201ENST00000238379 DEPDC7Q96QD5 511 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 PHOX2BQ99453 314 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 RTN4RQ9BZR6 473 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 FAM86C1Q9NVL1 165 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 PADI1Q9ULC6 663 aa13.97□□□□□ -0.17
HDHD3-201ENST00000238379 C9orf172C9J069 976 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 H3BN98 237 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 CHP2O43745 196 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF354AO60765 605 aaPredicted RBP13.96□□□□□ -0.17
HDHD3-201ENST00000238379 UBL4AP11441 157 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 GABRB1P18505 474 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 FPR3P25089 353 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 FMO3P31513 532 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 NR1H2P55055 460 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 SKP2Q13309 424 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 HES3Q5TGS1 186 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 SLX4IPQ5VYV7 408 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 C6orf15Q6UXA7 325 aaPredicted RBP13.96□□□□□ -0.17
HDHD3-201ENST00000238379 KIF18BQ86Y91 864 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 DEPDC4Q8N2C3 294 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 POGLUT1Q8NBL1 392 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 BPIFB6Q8NFQ5 453 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 PHOSPHO1Q8TCT1 267 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 GRHL3Q8TE85 626 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 TMEM239Q8WW34 195 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF426Q9BUY5 554 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 EXOSC3Q9NQT5 275 aaKnown RBP13.96□□□□□ -0.17
HDHD3-201ENST00000238379 ZNF226Q9NYT6 803 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 NPFFR2Q9Y5X5 522 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 HS3ST3B1Q9Y662 390 aa13.96□□□□□ -0.17
HDHD3-201ENST00000238379 KNTC1P50748 2209 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 IGHV1-45A0A0A0MS14 117 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 A0A1W2PQD3 144 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 OR6C70A6NIJ9 312 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 ALG1L2C9J202 215 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 ZNF264O43296 627 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 XPNPEP2O43895 674 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 ZFAND5O76080 213 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 PTNP21246 168 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 NBL1P41271 181 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 NRG3P56975 720 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 EIF3IQ13347 325 aaKnown RBP13.95□□□□□ -0.18
HDHD3-201ENST00000238379 SMN1Q16637 294 aaKnown RBP13.95□□□□□ -0.18
HDHD3-201ENST00000238379 ULK3Q6PHR2 472 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 CBLN3Q6UW01 205 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 KIRREL2Q6UWL6 708 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 LINC00114Q6XXX2 140 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 RASSF6Q6ZTQ3 369 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 OR5L2Q8NGL0 311 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 RNF217Q8TC41 542 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 THAP3Q8WTV1 239 aaPredicted RBP13.95□□□□□ -0.18
HDHD3-201ENST00000238379 SGCDQ92629 289 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 IMMP1LQ96LU5 166 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 BLOC1S6Q9UL45 172 aa13.95□□□□□ -0.18
HDHD3-201ENST00000238379 GTPBP1O00178 669 aaKnown RBP13.94□□□□□ -0.18
HDHD3-201ENST00000238379 FADS1O60427 444 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 PPM1BO75688 479 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 OR6B1O95007 311 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 NADKO95544 446 aaPredicted RBP13.94□□□□□ -0.18
HDHD3-201ENST00000238379 EEF1B2P24534 225 aaKnown RBP13.94□□□□□ -0.18
HDHD3-201ENST00000238379 FOLR3P41439 243 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 GPR4P46093 362 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 GIPRP48546 466 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 GABARAPL2P60520 117 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 CDC42P60953 191 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 ALG10BQ5I7T1 473 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 C12orf73Q69YU5 71 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 CCDC103Q8IW40 242 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 CADM2Q8N3J6 435 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 ELP5Q8TE02 316 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 MPP4Q96JB8 637 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 HS6ST2Q96MM7 605 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 ZNF700Q9H0M5 742 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 DSN1Q9H410 356 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 POLR1BQ9H9Y6 1135 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 ZBTB20Q9HC78 741 aaPredicted RBP13.94□□□□□ -0.18
HDHD3-201ENST00000238379 PAK1IP1Q9NWT1 392 aaPredicted RBP13.94□□□□□ -0.18
HDHD3-201ENST00000238379 CARD8Q9Y2G2 431 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 HEATR5AQ86XA9 2040 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 WWP2O00308 870 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 CDC42EP2O14613 210 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 CD63P08962 238 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 LINGO3P0C6S8 592 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 CDK4P11802 303 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 COX6A1P12074 109 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 STAT5AP42229 794 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 ALDH3B2P48448 385 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 CDK5Q00535 292 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 PRKCDQ05655 676 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 NADK2Q4G0N4 442 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 ZNF773Q6PK81 442 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 MARCH3Q86UD3 253 aa13.94□□□□□ -0.18
HDHD3-201ENST00000238379 SATL1Q86VE3 508 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms