RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Slc39a8Q91W10 462 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Rbm7Q9CQT2 265 aaKnown RBP9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zfp773Q9CZ29 471 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Srebf1Q9WTN3 1134 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mocs2Q9Z223 189 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1315-ps1A0A140LI66 314 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 D7Ertd443eD2J0Y4 644 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 KitlgP20826 273 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Opn1swP51491 346 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm5113Q3UGK8 141 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Grm5Q3UVX5 1203 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Methig1Q76I26 264 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zik1Q80YP6 463 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 GanabQ8BHN3 944 aaKnown RBP9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 DrgxQ8BYH0 263 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Lgi4Q8K1S1 537 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn1r219Q8R271 312 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn1r200Q8R281 312 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr514Q8VFZ6 310 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1316Q8VG12 314 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Retreg3Q9CQV4 466 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tmem43Q9DBS1 400 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm21854A0A087WNM4 232 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1156A2AVC3 323 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ccrl2O35457 360 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cops3O88543 423 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Camk2aP11798 478 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 PrkcaP20444 672 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Wnt7bP28047 349 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tnfsf9P41274 309 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Sqstm1Q64337 442 aaKnown RBP9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Kiaa1456Q80WQ4 447 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Coq4Q8BGB8 266 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gjd4Q8BSD4 364 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pars2Q8CFI5 475 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr444Q8VFS6 310 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 GraspQ9JJA9 392 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Syt8Q9R0N6 395 aa9.6□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Glp1rO35659 463 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Entpd2O55026 495 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pdx1P52946 284 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Rps26P62855 115 aaKnown RBP9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1115Q7TR53 326 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr366Q7TRY4 309 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Atg4bQ8BGE6 393 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 B4gat1Q8BWP8 415 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pithd1Q8BWR2 211 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tmem200aQ8C817 491 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 NansQ99J77 359 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Rnf181Q9CY62 165 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hsd17b11Q9EQ06 298 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Popdc3Q9ES81 291 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fthl17bA2AHC5 176 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fthl17cA2AHC6 176 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr370E9Q848 314 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1564K7N6V7 318 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fcgr2P08101 330 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cxcl5P50228 132 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Lhx3P50481 400 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cav3P51637 151 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 SnrpgP62309 76 aaKnown RBP9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fthl17dQ3SXD1 176 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fthl17fQ3SXD2 176 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Rnf215Q5SPX3 379 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 IppkQ6P1C1 489 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Slc2a10Q8VHD6 536 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gmpr2Q99L27 348 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fthl17Q99MX2 176 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ppp6cQ9CQR6 305 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr68E9PYY2 315 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Milr1Q3TB92 246 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tamm41Q3TUH1 337 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pnrc1Q3TWH3 297 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Plpp5Q3UMZ3 260 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pld6Q5SWZ9 221 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Slc38a1Q8K2P7 485 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Rfc3Q8R323 356 aaKnown RBP9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Or51e2Q8VBV9 320 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Slc22a26Q91WJ2 552 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm43951A0A0N4SUT6 962 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1164A2AVT5 326 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 OgdhlE9Q7L0 1029 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Sp100O35892 482 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Il1bP10749 269 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 GypaP14220 168 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gpx5P21765 221 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gng8P63078 70 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 DtlQ3TLR7 729 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cd300lfQ6SJQ7 337 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Znf516Q7TSH3 1157 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pcdh8Q7TSK3 1070 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Trib2Q8K4K3 343 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr339Q8VGK8 309 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 TardbpQ921F2 414 aaKnown RBP9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Adgrl4Q923X1 739 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr71Q9QZ18 312 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Coro1bQ9WUM3 484 aaKnown RBP9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Prps1l3G3UXL2 318 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 E2f3O35261 457 aa9.59□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Papss2O88428 621 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms