RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ccdc187Q8C5V8 958 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Zbtb26Q8C8S0 451 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr109Q8VG96 314 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Elp2Q91WG4 831 aaKnown RBP10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cmtm3Q99LJ5 184 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Pdzk1ip1Q9CQH0 114 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Dnmt3lQ9CWR8 421 aaKnown RBP10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Slc25a27Q9D6D0 322 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Izumo1Q9D9J7 397 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tex44Q9DA60 530 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Col11a1Q61245 1804 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 FcmrA1KXC4 422 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Spata6lB2RV46 347 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Vmn1r86L7N213 316 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Arg2O08691 354 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Dgcr6O35347 198 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 NppaP05125 152 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cdh4P39038 913 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Csrp3P50462 194 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ap2s1P62743 142 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Slc10a2P70172 348 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 RykQ01887 594 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Obox3Q3UT54 335 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Commd6Q3V4B5 87 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Yipf6Q8BR70 236 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Slc22a12Q8CFZ5 553 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Noxo1Q8VCM2 349 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr818Q8VG46 318 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr683Q8VGV1 319 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tex12Q9CR81 123 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Prss52Q9D9M0 321 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 A0A1L1STL9 112 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Zp3P10761 424 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ubl4aP21126 157 aaKnown RBP10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 EvlP70429 414 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ccdc69Q3TCJ8 202 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Alg11Q3TZM9 492 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cxcl3Q6W5C0 100 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Prr14Q7TPN9 612 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Igsf5Q7TSN7 370 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 AntxrlQ8BVM2 641 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Nudt6Q8CH40 313 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Rfwd3Q8CIK8 774 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Mchr1Q8JZL2 353 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gfm1Q8K0D5 751 aaKnown RBP10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Plekho2Q8K124 495 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 MepceQ8K3A9 666 aaKnown RBP10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Sfxn2Q925N2 322 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Dnaja4Q9JMC3 397 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 SpastQ9QYY8 614 aa10.22□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ggta1l1A2AUQ7 319 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm21904A8HG57 180 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm21866J3QMH4 180 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cntn1P12960 1020 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr6P34986 316 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Nkx3-2P97503 333 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm10696Q3UTC4 357 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Sema3gQ4LFA9 780 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 OclnQ61146 521 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ppp3r1Q63810 170 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Carns1Q6ZPS2 827 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Rpl35Q6ZWV7 123 aaKnown RBP10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Q8K039 155 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Rcbtb2Q99LJ7 551 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 ClpsQ9CQC2 113 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tmem41aQ9D8U2 264 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Fank1Q9DAM9 344 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Fhl5Q9WTX7 284 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cldn8Q9Z260 225 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 H2afb1S4R1E0 115 aa10.21□□□□□ -0.77
Msh3-201ENSMUST00000022220 Lilra6A0A0B4J1F3 663 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Zbtb34A2ATY4 518 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tceal7A3KGA4 98 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gm11127A7VMS2 374 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr59B1ARL3 323 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Prr22F6TNE3 422 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Scarb2O35114 478 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Fcgr3P08508 261 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Hoxa10P31310 416 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Efna1P52793 205 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rnf223Q3UV31 285 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Pon2Q62086 354 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Nsg1Q62092 185 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Ap1s3Q7TN05 154 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr1318Q7TQW6 320 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Serpinb9fQ80UK5 377 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr1317Q8VF84 316 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr202Q8VGQ3 307 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 MrgprhQ99MT8 321 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cldn6Q9Z262 219 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gm6710A2ART0 554 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tex264E9Q137 309 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Alkal1J3QPP8 127 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gm8281L7N235 204 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 EomesO54839 707 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cd14P10810 366 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tspan5P62080 268 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Mfsd2bQ3T9M1 494 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Pak6Q3ULB5 682 aa10.21□□□□□ -0.78
Msh3-201ENSMUST00000022220 Thoc6Q5U4D9 341 aa10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms