RNA–Protein interactions for RNA: ENST00000641575.1

SCN1A-219, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 BASIC

Gene SCN1A, Length 12,874 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-219ENST00000641575 RALGAPA2Q2PPJ7 1873 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 NME6O75414 186 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 RDH16O75452 317 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MED6O75586 246 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 INHAP05111 366 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ABHD2P08910 425 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 HOXC4P09017 264 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 S1PR1P21453 382 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PAX6P26367 422 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SLC6A8P48029 635 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ARSDP51689 593 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MLLT10P55197 1068 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OR12D2P58182 307 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ABHD18Q0P651 414 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 RRN3P1Q2M238 152 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MYLK3Q32MK0 819 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ANKRD55Q3KP44 614 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 POGLUT1Q8NBL1 392 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 RBM15BQ8NDT2 890 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 RBPMSQ93062 196 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MTERF1Q99551 399 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TKTL2Q9H0I9 626 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ATG10Q9H0Y0 220 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MMP27Q9H306 513 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 FOLH1BQ9HBA9 442 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 NOX3Q9HBY0 568 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ZNF160Q9HCG1 818 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ADAP2Q9NPF8 381 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 B3GNT2Q9NY97 397 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 C1RLQ9NZP8 487 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 FETUBQ9UGM5 382 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 UTS2RQ9UKP6 389 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 DENND4CQ5VZ89 1909 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 A8MX80 341 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 EIF1AYO14602 144 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 RASAL1O95294 804 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 GSRP00390 522 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 VTNP04004 478 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PCCBP05166 539 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CFHP08603 1231 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SNRNP70P08621 437 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 G6PDP11413 515 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 GJA4P35212 333 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 EIF1AXP47813 144 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MTCP1P56278 107 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 KCNC4Q03721 635 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SCARB2Q14108 478 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ATPAF1Q5TC12 328 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 KLHDC7AQ5VTJ3 777 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SLC36A1Q7Z2H8 476 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 GRAMD2AQ8IUY3 354 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OR10T2Q8NGX3 314 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OR2T27Q8NH04 317 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PIWIL2Q8TC59 973 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 NT5C3BQ969T7 300 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MMABQ96EY8 250 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TOE1Q96GM8 510 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ZNF347Q96SE7 839 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ELOVL1Q9BW60 279 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SPHK1Q9NYA1 384 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 USP36Q9P275 1121 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CHRNA9Q9UGM1 479 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 DOCK2Q92608 1830 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PLXNA3P51805 1871 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SLC1A7O00341 560 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 DLGAP1O14490 977 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 WNT9AO14904 365 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 LIASO43766 372 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 NMT2O60551 498 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 LILRA1O75019 489 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OR2B3O76000 313 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 DXOO77932 396 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CNIH1O95406 144 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 RHCEP18577 417 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MTNR1AP48039 350 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PRKXP51817 358 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CDH12P55289 794 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 UBE2KP61086 200 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 GRB2P62993 217 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CYCSP99999 105 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ELP2Q6IA86 826 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 LAMTOR1Q6IAA8 161 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ADGRD1Q6QNK2 874 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TEX261Q6UWH6 196 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CARM1Q86X55 608 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ANKRD13BQ86YJ7 626 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SFTPA2Q8IWL1 248 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SFTPA1Q8IWL2 248 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OR13C8Q8NGS7 320 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SH2B3Q9UQQ2 575 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 U3KQ87 197 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MAP1AP78559 2803 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SOBPA7XYQ1 873 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CXorf49A8MYA2 514 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 E9PQ18 207 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 J3KR12 359 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TLR4O00206 839 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PAGE1O75459 146 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OR4F21O95013 312 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SCGB1C2P0DMR2 95 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms