RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 DTNAQ9Y4J8 743 aa12.44□□□□□ -0.42
PNKP-228ENST00000637325 UQCRHLA0A096LP55 91 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 A0A1W2PNV4 684 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 TUBAL3A6NHL2 446 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 ANKRD28O15084 1053 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 STX11O75558 287 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 SMNDC1O75940 238 aaKnown RBP eCLIP12.43□□□□□ -0.42
PNKP-228ENST00000637325 CRHP06850 196 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 ALDOCP09972 364 aaKnown RBP12.43□□□□□ -0.42
PNKP-228ENST00000637325 EIF1P41567 113 aaKnown RBP12.43□□□□□ -0.42
PNKP-228ENST00000637325 EIF1AXP47813 144 aaKnown RBP12.43□□□□□ -0.42
PNKP-228ENST00000637325 PHC1P78364 1004 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 PON3Q15166 354 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 GPR68Q15743 365 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 TMEM44Q2T9K0 475 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 PLPPR5Q32ZL2 321 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 PDSS1Q5T2R2 415 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 CDH24Q86UP0 819 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 GTPBP8Q8N3Z3 284 aaPredicted RBP12.43□□□□□ -0.42
PNKP-228ENST00000637325 TMCO5AQ8N6Q1 288 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 RFWD2Q8NHY2 731 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 FNDC9Q8TBE3 224 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 ZNF845Q96IR2 970 aaPredicted RBP12.43□□□□□ -0.42
PNKP-228ENST00000637325 RNF145Q96MT1 663 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 OR51I1Q9H343 314 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 DNAJB12Q9NXW2 375 aaKnown RBP12.43□□□□□ -0.42
PNKP-228ENST00000637325 JKAMPQ9P055 326 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 PACSIN3Q9UKS6 424 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 CARD8Q9Y2G2 431 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 ZNF175Q9Y473 711 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 FREM1Q5H8C1 2179 aa12.43□□□□□ -0.42
PNKP-228ENST00000637325 C7orf72A4D263 438 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 SCN2BO60939 215 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 SYNGR4O95473 234 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 OPN1LWP04000 364 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 OR12D1P0DN82 309 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 FCGR2AP12318 317 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 KHKP50053 298 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 P2RX1P51575 399 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 RAC1P63000 192 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 SIRPAP78324 504 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 SORDQ00796 357 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 OCRLQ01968 901 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 ZNF117Q03924 483 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 ARHGAP11BQ3KRB8 267 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 FBXW10Q5XX13 1052 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 TNFAIP8L2Q6P589 184 aaPredicted RBP12.42□□□□□ -0.42
PNKP-228ENST00000637325 METTL25Q8N6Q8 603 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 TRIML2Q8N7C3 387 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 CHDHQ8NE62 594 aaPredicted RBP12.42□□□□□ -0.42
PNKP-228ENST00000637325 LINC01560Q8TB33 94 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 PIWIL2Q8TC59 973 aaKnown RBP12.42□□□□□ -0.42
PNKP-228ENST00000637325 XAGE5Q8WWM1 108 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 ZNF75CPQ92670 426 aaPredicted RBP12.42□□□□□ -0.42
PNKP-228ENST00000637325 ARL8AQ96BM9 186 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 OR52E6Q96RD3 313 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 PANX1Q96RD7 426 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 SLC35A5Q9BS91 424 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 POLDIP3Q9BY77 421 aaKnown RBP12.42□□□□□ -0.42
PNKP-228ENST00000637325 NMUR2Q9GZQ4 415 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 SERHL2Q9H4I8 314 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 TMEM185BQ9H7F4 350 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 PAQR5Q9NXK6 330 aaPredicted RBP12.42□□□□□ -0.42
PNKP-228ENST00000637325 BTNL2Q9UIR0 455 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 GPR45Q9Y5Y3 372 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 MED13LQ71F56 2210 aa12.42□□□□□ -0.42
PNKP-228ENST00000637325 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 CCDC154A6NI56 674 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 C9JVG2 144 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 TNFSF11O14788 317 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 MSTNO14793 375 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 ZNF264O43296 627 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 OIP5O43482 229 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 EIF4E2O60573 245 aaKnown RBP12.41□□□□□ -0.42
PNKP-228ENST00000637325 CYP7B1O75881 506 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 TNFSF13O75888 250 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 PLGP00747 810 aaPredicted RBP12.41□□□□□ -0.42
PNKP-228ENST00000637325 PGRP06401 933 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 UBL4AP11441 157 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 EPXP11678 715 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 IDO1P14902 403 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 CPOXP36551 454 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 ANXA11P50995 505 aaKnown RBP12.41□□□□□ -0.42
PNKP-228ENST00000637325 CCR4P51679 360 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 SUMO3P55854 103 aaPredicted RBP12.41□□□□□ -0.42
PNKP-228ENST00000637325 HPCAP84074 193 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 LRRC74AQ0VAA2 488 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 FGFBP1Q14512 234 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 NDUFAF6Q330K2 333 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.41□□□□□ -0.42
PNKP-228ENST00000637325 PDZK1Q5T2W1 519 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 SAXO2Q658L1 398 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 VWA1Q6PCB0 445 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 CBLN3Q6UW01 205 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 ZNF621Q6ZSS3 439 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 ESPNLQ6ZVH7 1005 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 GGNQ86UU5 652 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 LILRA2Q8N149 483 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 GLB1L3Q8NCI6 653 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms