RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PABPC4LP0CB38 370 aaKnown RBP16.09■□□□□ 0.17
PNKP-225ENST00000636214 CREB1P16220 341 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 UGT2B10P36537 528 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 CHI3L2Q15782 390 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 TMEM44Q2T9K0 475 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 GGNQ86UU5 652 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 STK32CQ86UX6 486 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 TMCO5AQ8N6Q1 288 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 OR2V1Q8NHB1 315 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 PSMA8Q8TAA3 256 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 COQ8BQ96D53 544 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 PKNOX2Q96KN3 472 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 WFIKKN1Q96NZ8 548 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 TMUB1Q9BVT8 246 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 CXorf36Q9H7Y0 433 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 GLRX2Q9NS18 164 aa16.09■□□□□ 0.17
PNKP-225ENST00000636214 FLNAP21333 2647 aaKnown RBP16.09■□□□□ 0.17
PNKP-225ENST00000636214 ZFHX3Q15911 3703 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 CXCL13O43927 109 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 SNUPNO95149 360 aaKnown RBP16.08■□□□□ 0.16
PNKP-225ENST00000636214 OPN1LWP04000 364 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 G6PDP11413 515 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 ELK4P28324 431 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 SFTPDP35247 375 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 ETV4P43268 484 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 SUMO3P55854 103 aaPredicted RBP16.08■□□□□ 0.16
PNKP-225ENST00000636214 EMX2Q04743 252 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 CD226Q15762 336 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 SMU1Q2TAY7 513 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 EXOSC6Q5RKV6 272 aaKnown RBP16.08■□□□□ 0.16
PNKP-225ENST00000636214 MREGQ8N565 214 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 ZNF610Q8N9Z0 462 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 OR5AK3PQ8NH89 298 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 ARL8AQ96BM9 186 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 PIK3IP1Q96FE7 263 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 ZC3HAV1LQ96H79 300 aaKnown RBP16.08■□□□□ 0.16
PNKP-225ENST00000636214 PPP1R36Q96LQ0 422 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 KLHL15Q96M94 604 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 C6orf203Q9P0P8 240 aaPredicted RBP16.08■□□□□ 0.16
PNKP-225ENST00000636214 CLEC4AQ9UMR7 237 aa16.08■□□□□ 0.16
PNKP-225ENST00000636214 NPIPA5A0A0B4J1W7 369 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 DUXAA6NLW8 204 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 NPIPA7E9PJI5 369 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 TM9SF1O15321 606 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 BIRC5O15392 142 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 DIAPH2O60879 1101 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 AK1P00568 194 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 CGAP01215 116 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 NPIPA8P0DM63 369 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 ARRB2P32121 409 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 P2RX1P51575 399 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 CCR4P51679 360 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 ATP12AP54707 1039 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 CLDN8P56748 225 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 CARD18P57730 90 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 ABCE1P61221 599 aaKnown RBP16.07■□□□□ 0.16
PNKP-225ENST00000636214 ZNF117Q03924 483 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 FOXF1Q12946 379 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 ZNF550Q7Z398 422 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 LILRA2Q8N149 483 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 VPS37AQ8NEZ2 397 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 RFWD2Q8NHY2 731 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 OSTF1Q92882 214 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 SLC35G5Q96KT7 338 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 OR7D2Q96RA2 312 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 DPY30Q9C005 99 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 KCNK9Q9NPC2 374 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 BEX4Q9NWD9 120 aaPredicted RBP16.07■□□□□ 0.16
PNKP-225ENST00000636214 DTNAQ9Y4J8 743 aa16.07■□□□□ 0.16
PNKP-225ENST00000636214 GPC6Q9Y625 555 aaPredicted RBP16.07■□□□□ 0.16
PNKP-225ENST00000636214 ADAMDEC1O15204 470 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 SS18L1O75177 396 aaPredicted RBP16.06■□□□□ 0.16
PNKP-225ENST00000636214 TUBBP07437 444 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 PPP3CBP16298 524 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 MATN1P21941 496 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 CRYGSP22914 178 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 ADH6P28332 368 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 SLC6A8P48029 635 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 ZNF844Q08AG5 666 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 FOXD4Q12950 439 aaPredicted RBP16.06■□□□□ 0.16
PNKP-225ENST00000636214 GUSBP1Q15486 140 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 BEND4Q6ZU67 534 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 CROCCP2Q86T23 111 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 RIMKLAQ8IXN7 391 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 ZNF781Q8N8C0 355 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 TOR1AIP2Q8NFQ8 470 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 OR4A15Q8NGL6 344 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 CPNE4Q96A23 557 aaPredicted RBP16.06■□□□□ 0.16
PNKP-225ENST00000636214 ADGRG7Q96K78 797 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 SSU72Q9NP77 194 aaKnown RBP16.06■□□□□ 0.16
PNKP-225ENST00000636214 EXD2Q9NVH0 621 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 GPATCH2Q9NW75 528 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 ASIC5Q9NY37 505 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 CARD8Q9Y2G2 431 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.06■□□□□ 0.16
PNKP-225ENST00000636214 RAP2CQ9Y3L5 183 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 ROS1P08922 2347 aa16.06■□□□□ 0.16
PNKP-225ENST00000636214 A0A0J9YW62 118 aa16.05■□□□□ 0.16
PNKP-225ENST00000636214 RNF103-CHMP3A0A140T963 221 aa16.05■□□□□ 0.16
PNKP-225ENST00000636214 LINGO3P0C6S8 592 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms