RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ZNF426Q9BUY5 554 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SLA2Q9H6Q3 261 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 HRASLSQ9HDD0 168 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 THUMPD1Q9NXG2 353 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 RNF181Q9P0P0 153 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CTTNBP2NLQ9P2B4 639 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CLN8Q9UBY8 286 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 PPP1R3CQ9UQK1 317 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 GSTK1Q9Y2Q3 226 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 MEMO1Q9Y316 297 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF337Q9Y3M9 751 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 WDR45Q9Y484 360 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 KDM6AO15550 1401 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 LY75O60449 1722 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SBF1O95248 1867 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF98A6NK75 572 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SHISA8B8ZZ34 492 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 H3BNX3 289 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 M0R296 226 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 GNB5O14775 395 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CLOCKO15516 846 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SLC28A2O43868 658 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 AIREO43918 545 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SC5DO75845 299 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SYF2O95926 243 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SAGP10523 405 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 HSPD1P10809 573 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SNRPBP14678 240 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CD36P16671 472 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ZP3P21754 424 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CRABP1P29762 137 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 CDK9P50750 372 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SRSF1Q07955 248 aaKnown RBP eCLIP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ORC2Q13416 577 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 DPYSL3Q14195 570 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 KRT81Q14533 505 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 HNF4GQ14541 408 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF268Q14587 947 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 GANABQ14697 944 aaKnown RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SMCO1Q147U7 214 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 TMED2Q15363 201 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ZNHIT3Q15649 155 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 OTUD3Q5T2D3 398 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ADAM5Q6NVV9 412 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SMIM5Q71RC9 77 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 FCRLAQ7L513 359 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 LMNTD1Q8N9Z9 388 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 MFSD9Q8NBP5 474 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 OR4D5Q8NGN0 318 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ADAMTS14Q8WXS8 1223 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 LGALS12Q96DT0 336 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 COPS8Q99627 209 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 G6PC3Q9BUM1 346 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SLC2A11Q9BYW1 496 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 METTL9Q9H1A3 318 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 NEUROG2Q9H2A3 272 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 POLE4Q9NR33 117 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 PHPT1Q9NRX4 125 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 C1GALT1Q9NS00 363 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SYBUQ9NX95 663 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 IMPACTQ9P2X3 320 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 EPHA6Q9UF33 1036 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 DUSP13Q9UII6 198 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ZNF490Q9ULM2 529 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-213ENST00000630925 SH2B3Q9UQQ2 575 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 B3GNT3Q9Y2A9 372 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ARFGEF1Q9Y6D6 1849 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 UBN2Q6ZU65 1347 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 PCDH11XQ9BZA7 1347 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 PCDH11YQ9BZA8 1340 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 TOGARAM1Q9Y4F4 1720 aa4.45□□□□□ -1.7
SDCBP-213ENST00000630925 ABCC11Q96J66 1382 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 ANKRD30BQ9BXX2 1392 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 ABCC6O95255 1503 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 ELOA3CA0A087WX78 387 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-213ENST00000630925 A0A1W2PNV4 684 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 ELOA3DA6NLF2 546 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-213ENST00000630925 SYNGR3O43761 229 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 N4BP1O75113 896 aaKnown RBP4.44□□□□□ -1.7
SDCBP-213ENST00000630925 ZMPSTE24O75844 475 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 PAPSS2O95340 614 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-213ENST00000630925 MBPP02686 304 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-213ENST00000630925 CRHP06850 196 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 HOXC6P09630 235 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 SP9P0CG40 484 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 FCER1AP12319 257 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 BGNP21810 368 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 PCK1P35558 622 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 GLUD2P49448 558 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 RASSF2P50749 326 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 ADPRHP54922 357 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 PKNOX1P55347 436 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 RAP2BP61225 183 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 SLC18A2Q05940 514 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 STX4Q12846 297 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 GPNMBQ14956 572 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 EMC2Q15006 297 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 CYTH1Q15438 398 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 SLC9A3R2Q15599 337 aa4.44□□□□□ -1.7
SDCBP-213ENST00000630925 MEP1AQ16819 746 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms