RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 HIF1ANQ9NWT6 349 aa11.06□□□□□ -0.64
SHPRH-211ENST00000629427 TAAR2Q9P1P5 351 aa11.06□□□□□ -0.64
SHPRH-211ENST00000629427 GHRLQ9UBU3 117 aa11.06□□□□□ -0.64
SHPRH-211ENST00000629427 OR14J1Q9UGF5 321 aa11.06□□□□□ -0.64
SHPRH-211ENST00000629427 DDX60Q8IY21 1712 aaKnown RBP11.06□□□□□ -0.64
SHPRH-211ENST00000629427 A0A1W2PQL4 384 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 MEGF11A6BM72 1044 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 CASC3O15234 703 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 ENSAO43768 121 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 MSR1P21757 451 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 PRSS3P35030 304 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 ALDH3B2P48448 385 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 ZP2Q05996 745 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 CNN3Q15417 329 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 HNRNPA1L2Q32P51 320 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 MRPL10Q7Z7H8 261 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 STK35Q8TDR2 534 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 OR6C1Q96RD1 312 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 PRRC2BQ5JSZ5 2229 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 FOXE1O00358 373 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 MMP2P08253 660 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 ZNF44P15621 663 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 STEAP4Q687X5 459 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 MOB3CQ70IA8 216 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 METTL25Q8N6Q8 603 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 NAT6Q93015 286 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 NUDT22Q9BRQ3 303 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 ACOT13Q9NPJ3 140 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 SACM1LQ9NTJ5 587 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 CUTCQ9NTM9 273 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 PRDM4Q9UKN5 801 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 C12orf71A8MTZ7 269 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 KDM4EB2RXH2 506 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 EIF3FO00303 357 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 FRS3O43559 492 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 CBX7O95931 251 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 ERVK-25P63136 954 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 MRPL43Q8N983 215 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 UBXN10Q96LJ8 280 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 INTS14Q96SY0 518 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 TSPAN10Q9H1Z9 355 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 PREBQ9HCU5 417 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 CARD8Q9Y2G2 431 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 C1orf105O95561 183 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 ARSBP15848 533 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 CD68P34810 354 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 PCGF2P35227 344 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 KCTD20Q7Z5Y7 419 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 CPOQ8IVL8 374 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 CHDHQ8NE62 594 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 OR1J4Q8NGS1 313 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 ATOH1Q92858 354 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 PTERQ96BW5 349 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 TRMT2BQ96GJ1 504 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 APMAPQ9HDC9 416 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 HSPB6O14558 160 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 STK17BO94768 372 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 SERPINA7P05543 415 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 PVRP15151 417 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 SERPINA2P20848 420 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 TAS2R20P59543 309 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 AMIGO3Q86WK7 504 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 KIF18BQ86Y91 864 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 RBM12BQ8IXT5 1001 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 TCEAL8Q8IYN2 117 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 IL17RDQ8NFM7 739 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 TESQ9UGI8 421 aaKnown RBP11.05□□□□□ -0.64
SHPRH-211ENST00000629427 D6RAR5 112 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 GNB3P16520 340 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 HOXA9P31269 272 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 CPOXP36551 454 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 HIPK2Q9H2X6 1198 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 MED16Q9Y2X0 877 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 PCDHGA1Q9Y5H4 931 aa11.05□□□□□ -0.64
SHPRH-211ENST00000629427 B4DXG7 233 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 BCAT2O15382 392 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 DCNP07585 359 aaKnown RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SLC6A11P48066 632 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 EFNA3P52797 238 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SEC61A1P61619 476 aaKnown RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 CDHR3Q6ZTQ4 885 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 DPPA4Q7L190 304 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 BBS1Q8NFJ9 593 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 CD200R1Q8TD46 325 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 TAAR8Q969N4 342 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 GMLQ99445 158 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 KLF16Q9BXK1 252 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 GPN2Q9H9Y4 310 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 IGSF5Q9NSI5 407 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 RNASET2O00584 256 aaKnown RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 PSMB10P40306 273 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 OR1D4P47884 311 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 HYAL4Q2M3T9 481 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 KIAA1211LQ6NV74 962 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 PHOSPHO2Q8TCD6 241 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 GPR148Q8TDV2 347 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 ISG20Q96AZ6 181 aaKnown RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 LAMB4A4D0S4 1761 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 AP1G1O43747 822 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 IFNA17P01571 189 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms