RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ACSF3Q4G176 576 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 NSUN5P2Q63ZY6 315 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 TYW3Q6IPR3 259 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC2A7Q6PXP3 512 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 ZAR1Q86SH2 424 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 GTPBP8Q8N3Z3 284 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 CA5BP1Q8WTZ4 195 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 ARSGQ96EG1 525 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 LRRC46Q96FV0 321 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 WDYHV1Q96HA8 205 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 UCN2Q96RP3 112 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 TM9SF2Q99805 663 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 SH3GL1Q99961 368 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 TTYH2Q9BSA4 534 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 RUBCNLQ9H714 662 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 EXOSC3Q9NQT5 275 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 FBXO34Q9NWN3 711 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 ALKBH4Q9NXW9 302 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 MKLN1Q9UL63 735 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 PCDHB14Q9Y5E9 798 aa12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 NCOA6Q14686 2063 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-216ENST00000626000 A0A0G2JPF8 293 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 AGAP5A6NIR3 686 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 HNRNPCL2B2RXH8 293 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 HNRNPCL3B7ZW38 293 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 FCMRO60667 390 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 HNRNPCL1O60812 293 aaKnown RBP12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 UGT2B17O75795 530 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 ZIC2O95409 532 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 H6PDO95479 791 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 CLDN14O95500 239 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 IL2RAP01589 272 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 HNRNPCL4P0DMR1 293 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 FCGR2AP12318 317 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 PGCP20142 388 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 FKBP2P26885 142 aaKnown RBP12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 ADORA2A-AS1P86434 159 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 FGFBP1Q14512 234 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 RGNQ15493 299 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 CD226Q15762 336 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 TMEM44Q2T9K0 475 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 PDSS1Q5T2R2 415 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 PDZK1Q5T2W1 519 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 FRRS1Q6ZNA5 592 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 ZNF440Q8IYI8 595 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 TMCO5AQ8N6Q1 288 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 GATSQ8NAP1 163 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 OR5W2Q8NH69 310 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 PNPT1Q8TCS8 783 aaKnown RBP12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 ST8SIA1Q92185 356 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 SDCCAG3Q96C92 435 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 MRGPRX4Q96LA9 322 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 RTN4RQ9BZR6 473 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 LAT2Q9GZY6 243 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 A4GALTQ9NPC4 353 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 MED17Q9NVC6 651 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 PLEKHB1Q9UF11 243 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 ICAM5Q9UMF0 924 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 ZNF232Q9UNY5 417 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 RPH3AQ9Y2J0 694 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 FAM215AQ9Y5M1 114 aa12.68□□□□□ -0.38
SNRPA1-216ENST00000626000 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 C5orf58C9J3I9 102 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 THBS1P07996 1170 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 GLI4P10075 376 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 IL7RP16871 459 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 PEX19P40855 299 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 LHX2P50458 406 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 MVDP53602 400 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 B3GALT5-AS1P59052 145 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 KCNJ10P78508 379 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 ZNF117Q03924 483 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 PMPCAQ10713 525 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 LARS2Q15031 903 aaKnown RBP12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 PLPPR5Q32ZL2 321 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC25A35Q3KQZ1 300 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 LIN52Q52LA3 116 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 OR2A2Q6IF42 318 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 C3P1Q6ZMU1 363 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 DHDDSQ86SQ9 333 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 KRT73Q86Y46 540 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC30A8Q8IWU4 369 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 PCYOX1LQ8NBM8 494 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 FAM71CQ8NEG0 241 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 OR10Q1Q8NGQ4 319 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 WNT2BQ93097 391 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 SH3YL1Q96HL8 342 aaPredicted RBP12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 SPATA5L1Q9BVQ7 753 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 SPATA9Q9BWV2 254 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC38A1Q9H2H9 487 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC24A3Q9HC58 644 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 BCL2L10Q9HD36 194 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC52A3Q9NQ40 469 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 ZNF629Q9UEG4 869 aaPredicted RBP12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 VDAC3Q9Y277 283 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 CARD8Q9Y2G2 431 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 IFT52Q9Y366 437 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms