RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 FCRLAQ7L513 359 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 CCDC116Q8IYX3 515 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 ZNF433Q8N7K0 673 aaPredicted RBP12.16□□□□□ -0.46
SNX1-214ENST00000625244 OR9A2Q8NGT5 310 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 POC1BQ8TC44 478 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 UBTD2Q8WUN7 234 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 SLC9A6Q92581 669 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 TSPAN17Q96FV3 270 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 KLHL15Q96M94 604 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 RHOJQ9H4E5 214 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 CXorf36Q9H7Y0 433 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 GP6Q9HCN6 339 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 ESM1Q9NQ30 184 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 USP22Q9UPT9 525 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 SPEF1Q9Y4P9 236 aa12.16□□□□□ -0.46
SNX1-214ENST00000625244 HEATR1Q9H583 2144 aaKnown RBP12.16□□□□□ -0.46
SNX1-214ENST00000625244 A0A087WZY1 265 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 C9JVG2 144 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 RAD51DO75771 328 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 IL33O95760 270 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 ME2P23368 584 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 ZFP36P26651 326 aaKnown RBP12.15□□□□□ -0.46
SNX1-214ENST00000625244 SFTPDP35247 375 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 SPRP35270 261 aaPredicted RBP12.15□□□□□ -0.46
SNX1-214ENST00000625244 CLK3P49761 638 aaKnown RBP12.15□□□□□ -0.46
SNX1-214ENST00000625244 ATP6V0D1P61421 351 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 FOXL1Q12952 345 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 UAP1Q16222 522 aaPredicted RBP12.15□□□□□ -0.46
SNX1-214ENST00000625244 ERCC6LQ2NKX8 1250 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 PLPPR5Q32ZL2 321 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 GRTP1Q5TC63 336 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 LILRA2Q8N149 483 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 NUP43Q8NFH3 380 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 CPNE4Q96A23 557 aaPredicted RBP12.15□□□□□ -0.46
SNX1-214ENST00000625244 ZNF775Q96BV0 537 aaPredicted RBP12.15□□□□□ -0.46
SNX1-214ENST00000625244 TM4SF18Q96CE8 201 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 JMJD8Q96S16 334 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 SERPINI1Q99574 410 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 KLHDC3Q9BQ90 382 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 MCMBPQ9BTE3 642 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 MRPL1Q9BYD6 325 aaKnown RBP12.15□□□□□ -0.46
SNX1-214ENST00000625244 ANKZF1Q9H8Y5 726 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNX1-214ENST00000625244 ADAM29Q9UKF5 820 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 PSME2Q9UL46 239 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 WBP11Q9Y2W2 641 aaKnown RBP12.15□□□□□ -0.46
SNX1-214ENST00000625244 RNF11Q9Y3C5 154 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 TRAF6Q9Y4K3 522 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 ZNF780BQ9Y6R6 833 aa12.15□□□□□ -0.46
SNX1-214ENST00000625244 V9GYY5 206 aaPredicted RBP12.15□□□□□ -0.46
SNX1-214ENST00000625244 IGHV3-15A0A0B4J1V0 119 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 A0A1W2PRB8 838 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 C7orf72A4D263 438 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 UBXN8O00124 270 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 INHBAP08476 426 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 HKR1P10072 659 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 EPHA1P21709 976 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 ENPP1P22413 925 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 ALDH9A1P49189 494 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 MANFP55145 182 aaKnown RBP12.14□□□□□ -0.47
SNX1-214ENST00000625244 SNRPD2P62316 118 aaKnown RBP12.14□□□□□ -0.47
SNX1-214ENST00000625244 MLC1Q15049 377 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 ARL13AQ5H913 290 aaPredicted RBP12.14□□□□□ -0.47
SNX1-214ENST00000625244 WDR93Q6P2C0 686 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 SHQ1Q6PI26 577 aaKnown RBP12.14□□□□□ -0.47
SNX1-214ENST00000625244 SLC46A3Q7Z3Q1 461 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 GLCCI1Q86VQ1 547 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 GSPT2Q8IYD1 628 aaKnown RBP12.14□□□□□ -0.47
SNX1-214ENST00000625244 ZDHHC22Q8N966 263 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 UBLCP1Q8WVY7 318 aaPredicted RBP12.14□□□□□ -0.47
SNX1-214ENST00000625244 ZBTB8AQ96BR9 441 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 ERP27Q96DN0 273 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 RBBP8Q99708 897 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 PSD2Q9BQI7 771 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 TBL1XR1Q9BZK7 514 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 ACSS3Q9H6R3 686 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 ALG9Q9H6U8 611 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 FKRPQ9H9S5 495 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 BCO1Q9HAY6 547 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 MED17Q9NVC6 651 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 HIF1ANQ9NWT6 349 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 NUDT4Q9NZJ9 180 aa12.14□□□□□ -0.47
SNX1-214ENST00000625244 MTO1Q9Y2Z2 717 aaKnown RBP12.14□□□□□ -0.47
SNX1-214ENST00000625244 EXOC1LA0A1B0GW35 172 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 B4DSR2 109 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 SUPT3HB4E1H0 165 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 ATP6V1G2-DDX39BF2Z307 99 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 SUPT3HO75486 399 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 PIAS1O75925 651 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 SNUPNO95149 360 aaKnown RBP12.13□□□□□ -0.47
SNX1-214ENST00000625244 ABHD2P08910 425 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 PGCP20142 388 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 RFX3P48380 749 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 PRR5P85299 388 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 POU4F1Q01851 419 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 ZNF155Q12901 538 aaPredicted RBP12.13□□□□□ -0.47
SNX1-214ENST00000625244 CYP27C1Q4G0S4 372 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 PAGE2Q7Z2X7 111 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 TRABD2AQ86V40 505 aa12.13□□□□□ -0.47
SNX1-214ENST00000625244 CNPY4Q8N129 248 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms