RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 Q6ZSR9 355 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 OLIG3Q7RTU3 272 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 VTCN1Q7Z7D3 282 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 LAPTM4BQ86VI4 370 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 BEST3Q8N1M1 668 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 ANKRD53Q8N9V6 530 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 CENPNQ96H22 339 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 C1QTNF6Q9BXI9 259 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 GRIP1Q9Y3R0 1128 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 CROCCQ5TZA2 2017 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SRRM3A6NNA2 597 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 GPR171O14626 319 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 TSPAN12O95859 305 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 FESP07332 822 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 THRBP10828 461 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 ENPP1P22413 925 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 TRHRP34981 398 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 APLNRP35414 380 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 WFDC8Q8IUA0 241 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 DTWD1Q8N5C7 304 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 YIPF7Q8N8F6 280 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SPACA9Q96E40 222 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SLC41A3Q96GZ6 507 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 CPNE5Q9HCH3 593 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 FBXO8Q9NRD0 319 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 VAPAQ9P0L0 249 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 DUSP13Q9UII6 198 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 RIMS3Q9UJD0 308 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 UTRNP46939 3433 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 GXYLT2A0PJZ3 443 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 TLX2O43763 284 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SOX6P35712 828 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SOX3P41225 446 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 RPS5P46782 204 aaKnown RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SOX8P57073 446 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 MALLQ13021 153 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 TIGD6Q17RP2 521 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 PAGE3Q5JUK9 113 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 ARMC4Q5T2S8 1044 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 LRIF1Q5T3J3 769 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 WBP2NLQ6ICG8 309 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 FAM181AQ8N9Y4 354 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SFXN5Q8TD22 340 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SPRYD4Q8WW59 207 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 NR4A3Q92570 626 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 CXorf36Q9H7Y0 433 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 PAPOLBQ9NRJ5 636 aaKnown RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SCN3AQ9NY46 2000 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 UBAP1Q9NZ09 502 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 LAMP5Q9UJQ1 280 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SPG11Q96JI7 2443 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 RBBP6Q7Z6E9 1792 aaKnown RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 FAM87AP0C7U9 286 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 PRKACGP22612 351 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 PPICP45877 212 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 AGFG1P52594 562 aaKnown RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 INSM1Q01101 510 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 DUSP2Q05923 314 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 QPRTQ15274 297 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 SPINK14Q6IE38 97 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 MFSD12Q6NUT3 480 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 NIPAL3Q6P499 406 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ERI1Q8IV48 349 aaKnown RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 IZUMO1Q8IYV9 350 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 OR9K2Q8NGE7 335 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 OR4K13Q8NH42 304 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 TREX2Q9BQ50 279 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 DDX31Q9H8H2 851 aaKnown RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 MARCH7Q9H992 704 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 PLEK2Q9NYT0 353 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 SLC7A7Q9UM01 511 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 SLC6A5Q9Y345 797 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 H2BFMP0C1H6 154 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 FPR1P21462 350 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ELAVL4P26378 380 aaKnown RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ETV4P43268 484 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 MEOX1P50221 254 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ARFIP1P53367 373 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 CEACAM7Q14002 265 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ALG10Q5BKT4 473 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ATP1A1-AS1Q5TC04 95 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 OGFOD2Q6N063 350 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ULK3Q6PHR2 472 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 LRFN4Q6PJG9 635 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 LMF2Q9BU23 707 aaKnown RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 NUDT9Q9BW91 350 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 TMEM121BQ9BXQ6 578 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 GPR160Q9UJ42 338 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 SH2B3Q9UQQ2 575 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 IGF2RP11717 2491 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 GGT3PA6NGU5 568 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 AQP12BA6NM10 295 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 PCDH17O14917 1159 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 CXCL13O43927 109 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 EFEMP2O95967 443 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 PEX19P40855 299 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 GAB1Q13480 694 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 NKPD1Q17RQ9 610 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 COL28A1Q2UY09 1125 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms