RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 IFI30P13284 250 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 BMP7P18075 431 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 PAICSP22234 425 aaKnown RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 ALAS2P22557 587 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 SLC2A5P22732 501 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 F8A1P23610 371 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 GDI1P31150 447 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 SSTR4P31391 388 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 ATP6V1E1P36543 226 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 RFX3P48380 749 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 CLDN2P57739 230 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 TAS2R43P59537 309 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 BTG1P62324 171 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 PPP2CBP62714 309 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 PPP2CAP67775 309 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 POU6F2P78424 691 aaPredicted RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 MRPS15P82914 257 aaKnown RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 ADAM15Q13444 863 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 IL18Q14116 193 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 P2RY14Q15391 338 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 GPR68Q15743 365 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 AMZ1Q400G9 498 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 TRMT12Q53H54 448 aaKnown RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 YIF1BQ5BJH7 314 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 TMEM196Q5HYL7 178 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 MANEAQ5SRI9 462 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 MRPL2Q5T653 305 aaKnown RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 PRPF38BQ5VTL8 546 aaKnown RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 HACD4Q5VWC8 232 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 HBMQ6B0K9 141 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 TBC1D3CQ6IPX1 549 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 PLET1Q6UQ28 207 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 ABHD13Q7L211 337 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 DGLUCYQ7Z3D6 616 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 OR4N5Q8IXE1 308 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 CDK20Q8IZL9 346 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 TBC1D3Q8IZP1 549 aaPredicted RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 NLGN4YQ8NFZ3 816 aaPredicted RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 OR51G2Q8NGK0 314 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 ZCCHC10Q8TBK6 192 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 COL26A1Q96A83 441 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 DMRTB1Q96MA1 342 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 FCRL4Q96PJ5 515 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 MYADMQ96S97 322 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 SLX1AQ9BQ83 275 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 KXD1Q9BQD3 176 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 MARVELD1Q9BSK0 173 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 DPH1Q9BZG8 443 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 MKRN2Q9H000 416 aaKnown RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 ENKD1Q9H0I2 346 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 NIPAL2Q9H841 368 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 ISG20L2Q9H9L3 353 aaKnown RBP8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 TRIM36Q9NQ86 728 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 CYSLTR2Q9NS75 346 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 CLDND1Q9NY35 253 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 HAO2Q9NYQ3 351 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 ACTR10Q9NZ32 417 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 IL20RAQ9UHF4 553 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 KCNE5Q9UJ90 142 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 SIGLEC7Q9Y286 467 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 SLC35A3Q9Y2D2 325 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 CENPFP49454 3210 aa8.92□□□□□ -0.98
IGHV3-54-201ENST00000622166 DAPL1A0PJW8 107 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 FAM221BA6H8Z2 402 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 POM121BA6NF01 834 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 ANKRD61A6NGH8 418 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 FAM183AA6NL82 134 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 A8MV72 311 aaPredicted RBP8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 PRR23D1E9PI22 279 aaPredicted RBP8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 CYR61O00622 381 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 SCAMP1O15126 338 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 NARSO43776 548 aaKnown RBP8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 BRINP1O60477 761 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 NKX2-2O95096 273 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 MT-ND5P03915 603 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 CA3P07451 260 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 PRR23D2P0DMB1 279 aaPredicted RBP8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 CHRNB1P11230 501 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 LAMP2P13473 410 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 ELK1P19419 428 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 COL9A1P20849 921 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 DRD5P21918 477 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 AK4P27144 223 aaPredicted RBP8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 ERP29P30040 261 aaKnown RBP8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 MAT2AP31153 395 aaKnown RBP8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 THBS2P35442 1172 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 RBM34P42696 430 aaKnown RBP8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 SEC13P55735 322 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 RAB25P57735 213 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 FOXK2Q01167 660 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 GAS6Q14393 721 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 PRICKLE4Q2TBC4 344 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 DEFB134Q4QY38 66 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 CCNJQ5T5M9 372 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 ENPP7Q6UWV6 458 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 TMEM184AQ6ZMB5 413 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 RNF44Q7L0R7 432 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 ZNF438Q7Z4V0 828 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 UBE2Q1Q7Z7E8 422 aa8.91□□□□□ -0.98
IGHV3-54-201ENST00000622166 LRRC28Q86X40 367 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms