RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ACTL7BQ9Y614 415 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 ABCA4P78363 2273 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 A0A0J9YW62 118 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 NPIPB9F8W1W9 429 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 CXCL13O43927 109 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 HRGP04196 525 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 LINGO3P0C6S8 592 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 CD1EP15812 388 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 RAC1P63000 192 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 PHC1P78364 1004 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 BST1Q10588 318 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 FOXF1Q12946 379 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 C6orf120Q7Z4R8 191 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 ANKRD46Q86W74 232 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 DPY30Q9C005 99 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 CLEC4AQ9UMR7 237 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 CARD8Q9Y2G2 431 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 TESMINQ9Y4I5 508 aa15.4■□□□□ 0.06
HMGN3-203ENST00000620514 PRRC2AP48634 2157 aaKnown RBP15.39■□□□□ 0.05
HMGN3-203ENST00000620514 MED13LQ71F56 2210 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 RNF103-CHMP3A0A140T963 221 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 A0A1W2PPR1 153 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 RNASET2O00584 256 aaKnown RBP15.39■□□□□ 0.05
HMGN3-203ENST00000620514 TNFSF11O14788 317 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 SCN2BO60939 215 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 MATN1P21941 496 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 SHC1P29353 583 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 CD79BP40259 229 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 ATP12AP54707 1039 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 CASP9P55211 416 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 WDR4P57081 412 aaKnown RBP15.39■□□□□ 0.05
HMGN3-203ENST00000620514 OCRLQ01968 901 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 TOMM34Q15785 309 aaPredicted RBP15.39■□□□□ 0.05
HMGN3-203ENST00000620514 MTERF4Q7Z6M4 381 aaKnown RBP15.39■□□□□ 0.05
HMGN3-203ENST00000620514 ZNF614Q8N883 585 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 ZNF610Q8N9Z0 462 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 OR4A15Q8NGL6 344 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 OR2V1Q8NHB1 315 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 ZNF524Q96C55 264 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 SLC35G5Q96KT7 338 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 WFIKKN1Q96NZ8 548 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 SDF2Q99470 211 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 FOXC2Q99958 501 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 PRRG4Q9BZD6 226 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 HOXD1Q9GZZ0 328 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 PLEKHF2Q9H8W4 249 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 KLHL28Q9NXS3 571 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 STOML1Q9UBI4 398 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 ICAM5Q9UMF0 924 aa15.39■□□□□ 0.05
HMGN3-203ENST00000620514 ANKRD28O15084 1053 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 ADAMDEC1O15204 470 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 EFNA2O43921 213 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 SNUPNO95149 360 aaKnown RBP15.38■□□□□ 0.05
HMGN3-203ENST00000620514 CPSF4O95639 269 aaKnown RBP15.38■□□□□ 0.05
HMGN3-203ENST00000620514 CD8BP10966 210 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 FCGR2AP12318 317 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 POU2F1P14859 743 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 LBPP18428 481 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 DNASE1P24855 282 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 CCKARP32238 428 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 HHATQ5VTY9 493 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 HBMQ6B0K9 141 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 BHLHB9Q6PI77 547 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 PAMR1Q6UXH9 720 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 FAM214BQ7L5A3 538 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 ZNF527Q8NB42 609 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 OR8J2Q8NGG1 315 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 FBXO27Q8NI29 283 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 CXXC4Q9H2H0 198 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 MEAF6Q9HAF1 191 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 NDRG3Q9UGV2 375 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 KCNE5Q9UJ90 142 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 PROCRQ9UNN8 238 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 DTNAQ9Y4J8 743 aa15.38■□□□□ 0.05
HMGN3-203ENST00000620514 CENPVL1A0A0U1RR11 272 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 H3BNH8 94 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 GTPBP1O00178 669 aaKnown RBP15.37■□□□□ 0.05
HMGN3-203ENST00000620514 SDHDO14521 159 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 CASKO14936 926 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 FCMRO60667 390 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 SOX30O94993 753 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 NUDT14O95848 222 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 SFTPDP35247 375 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 KCNJ5P48544 419 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 P2RX1P51575 399 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 NME5P56597 212 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 GPR68Q15743 365 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 SPANXN4Q5MJ08 99 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 PDZK1Q5T2W1 519 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 ESPNLQ6ZVH7 1005 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 ZNF550Q7Z398 422 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 LILRA2Q8N149 483 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 CHDHQ8NE62 594 aaPredicted RBP15.37■□□□□ 0.05
HMGN3-203ENST00000620514 RFWD2Q8NHY2 731 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 MGARPQ8TDB4 240 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 GPR119Q8TDV5 335 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 OSTF1Q92882 214 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 ARSGQ96EG1 525 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 KLHL15Q96M94 604 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 OR51I1Q9H343 314 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms