RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 RFPL4AA6NLU0 287 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 RFPL4AL1F8VTS6 287 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 CLIC1O00299 241 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 FPGTO14772 594 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 INSIG1O15503 277 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SUV39H1O43463 412 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SMAD6O43541 496 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 MBP02144 154 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 HCKP08631 526 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 RPA2P15927 270 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 GPX2P18283 190 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 TACR1P25103 407 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 CEACAM6P40199 344 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 ETV5P41161 510 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 PPT1P50897 306 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 CXADRP78310 365 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 GABREP78334 506 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 BLOC1S1P78537 153 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 MELKQ14680 651 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 OCLNQ16625 522 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 DUOXA1Q1HG43 343 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 C10orf120Q5SQS8 335 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 LHX8Q68G74 356 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 TAS1R1Q7RTX1 841 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 TPRA1Q86W33 373 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 NUDT13Q86X67 352 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 TGIF2LXQ8IUE1 241 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 NEIL3Q8TAT5 605 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SLC22A18Q96BI1 424 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 DPH2Q9BQC3 489 aaPredicted RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 DOHHQ9BU89 302 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 NTMT1Q9BV86 223 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SEC11CQ9BY50 192 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 CIPCQ9C0C6 399 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 DNAJC27Q9NZQ0 273 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 MARCH2Q9P0N8 246 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 STOX2Q9P2F5 926 aaPredicted RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 PPT2Q9UMR5 302 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 CARNS1A5YM72 827 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 ARRDC5A6NEK1 342 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 TMEM229AB2RXF0 380 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 GATBO75879 557 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 VNN2O95498 520 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 NFATC1O95644 943 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 EOMESO95936 686 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 IFNA2P01563 188 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 EIF4EP06730 217 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 MGMTP16455 207 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 HOXD9P28356 352 aaPredicted RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 MMP15P51511 669 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 HCCSP53701 268 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SIM1P81133 766 aaPredicted RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 FAM189BP81408 668 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SMAD3P84022 425 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 TAP2Q03519 686 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SF1Q15637 639 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 ZNF239Q16600 458 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 THEM4Q5T1C6 240 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 RNF165Q6ZSG1 346 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 ZNF383Q8NA42 475 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 OR11G2Q8NGC1 345 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 OR5J2Q8NH18 312 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 GPBAR1Q8TDU6 330 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SEPT5Q99719 369 aaPredicted RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 ZNF559Q9BR84 538 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 ACPTQ9BZG2 426 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 FAM117AQ9C073 453 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 KLHL31Q9H511 634 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 UNKLQ9H9P5 680 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 BEX1Q9HBH7 125 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 LAMA3Q16787 3333 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 URADA6NGE7 173 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 EBLN1P0CF75 366 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 EPB42P16452 691 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 NOS3P29474 1203 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 CRYBA2P53672 197 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 NUTF2P61970 127 aaKnown RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 FOXO1Q12778 655 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 SNTB2Q13425 540 aaKnown RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 GLDNQ6ZMI3 551 aaPredicted RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 ZNF621Q6ZSS3 439 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 TMPRSS11FQ6ZWK6 438 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 OR6V1Q8N148 313 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 RASGEF1AQ8N9B8 481 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 OR9Q2Q8NGE9 314 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 OR52I1Q8NGK6 324 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 MISP3Q96FF7 219 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 PANX1Q96RD7 426 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 ARHGAP9Q9BRR9 750 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 TLNRD1Q9H1K6 362 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 P2RY12Q9H244 342 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 FBXO44Q9H4M3 255 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 MVB12BQ9H7P6 319 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 C19orf12Q9NSK7 152 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 TESQ9UGI8 421 aaKnown RBP9.68□□□□□ -0.86
VPS11-207ENST00000620429 OPN4Q9UHM6 478 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 OARD1Q9Y530 152 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 OR6C74A6NCV1 312 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 ANKRD66B4E2M5 251 aa9.68□□□□□ -0.86
VPS11-207ENST00000620429 AP4M1O00189 453 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms