RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 NDFIP1Q9BT67 221 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 RDH14Q9HBH5 336 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ELOVL5Q9NYP7 299 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 BAIAP2L1Q9UHR4 511 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FER1L5A0AVI2 2057 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TCRBV5S4A2TA0A5A2 114 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 C2orf78A6NCI8 922 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ZNF840PA6NDX5 716 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 GPR32O75388 356 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ACP2P11117 423 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 GJA5P36382 358 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PITPNBP48739 271 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 RGS6P49758 472 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CTBSQ01459 385 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TSGA10IPQ3SY00 556 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ULK3Q6PHR2 472 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 NLRP8Q86W28 1048 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 KLBQ86Z14 1044 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CCDC28AQ8IWP9 274 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PEX13Q92968 403 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FOXRED1Q96CU9 486 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 PLK3Q9H4B4 646 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 AIG1Q9NVV5 245 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 NUP50Q9UKX7 468 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PSMD9O00233 223 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 RBP4P02753 201 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PET100P0DJ07 73 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 LIMK2P53671 638 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 EIF4EBP2Q13542 120 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 TEX44Q53QW1 395 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 MARCH8Q5T0T0 291 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.13□□□□□ -1.919e-7■■■■□ 23.4
LPP-220ENST00000617246 C1orf127Q8N9H9 656 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 C7orf43Q8WVR3 580 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CALHM2Q9HA72 323 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TAS2R1Q9NYW7 299 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PLEKHM1Q9Y4G2 1056 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PRAMEF25A6NGN4 478 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TARM1B6A8C7 271 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SPINT2O43291 252 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 KDELR1P24390 212 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ELK4P28324 431 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ADGRE1Q14246 886 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 NKAPLQ5M9Q1 402 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 MSANTD1Q6ZTZ1 278 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR13D1Q8NGV5 346 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ST8SIA4Q92187 359 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 DTD2Q96FN9 168 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CWH43Q9H720 699 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 KCNIP2Q9NS61 270 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PCDHGA3Q9Y5H0 932 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TRBC2A0A5B9 178 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ADAMDEC1O15204 470 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 GJB3O75712 270 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 BIDP55957 195 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FIGNQ5HY92 759 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CYB5R2Q6BCY4 276 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 EMBQ6PCB8 327 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 GABRG1Q8N1C3 465 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR2T12Q8NG77 320 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR4D6Q8NGJ1 314 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SOX7Q9BT81 388 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 DUSP26Q9BV47 211 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 IFT27Q9BW83 186 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 LHX9Q9NQ69 397 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 B3GNT3Q9Y2A9 372 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 METTL21EPA6NDL7 271 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 IL17AQ16552 155 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 RABL3Q5HYI8 236 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FAM209BQ5JX69 171 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 IER5LQ5T953 404 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SPRED1Q7Z699 444 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ZNF740Q8NDX6 193 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 C1orf162Q8NEQ5 155 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 NMD3Q96D46 503 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 B3GNT5Q9BYG0 378 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 WBP11Q9Y2W2 641 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 IL6P05231 212 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 GSTP1P09211 210 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 WNT3AP56704 352 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 DEFB121Q5J5C9 76 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR4C11Q6IEV9 310 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ADAMTS14Q8WXS8 1223 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PCDHB18PQ96TA0 734 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PKMYT1Q99640 499 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SLC6A7Q99884 636 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ANKRA2Q9H9E1 313 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ETNK1Q9HBU6 452 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PCDHGA9Q9Y5G4 932 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 B4GALT3O60512 393 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FMO6PO60774 539 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CLPXO76031 633 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 VNN1O95497 513 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ZNF16P17020 682 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 MIPP30301 263 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 IFI44LQ53G44 452 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 LETMD1Q6P1Q0 360 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CCDC36Q8IYA8 594 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PLD6Q8N2A8 252 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 OR10T2Q8NGX3 314 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms