RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 CBLN3Q6UW01 205 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 TMEM179BQ7Z7N9 219 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 MARCH3Q86UD3 253 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 BEST3Q8N1M1 668 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 TMEM156Q8N614 296 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 GATSQ8NAP1 163 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 PHOSPHO1Q8TCT1 267 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 PRR14Q9BWN1 585 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 TBL1XR1Q9BZK7 514 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 ING2Q9H160 280 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 TESQ9UGI8 421 aaKnown RBP13.88□□□□□ -0.19
CBWD1-225ENST00000616944 OAZ3Q9UMX2 235 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 LYVE1Q9Y5Y7 322 aa13.88□□□□□ -0.19
CBWD1-225ENST00000616944 TPRP12270 2363 aaKnown RBP13.88□□□□□ -0.19
CBWD1-225ENST00000616944 C17orf51A8MQB3 221 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 B4DXG7 233 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 ZNF264O43296 627 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 NDUFB5O43674 189 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 ENDOUP21128 410 aaKnown RBP13.87□□□□□ -0.19
CBWD1-225ENST00000616944 RRM2P31350 389 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 EIF2S3P41091 472 aaKnown RBP13.87□□□□□ -0.19
CBWD1-225ENST00000616944 HMGA2P52926 109 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 ZNF117Q03924 483 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 PIN1Q13526 163 aaPredicted RBP13.87□□□□□ -0.19
CBWD1-225ENST00000616944 GANABQ14697 944 aaKnown RBP13.87□□□□□ -0.19
CBWD1-225ENST00000616944 LPCAT4Q643R3 524 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 BICRALQ6AI39 1079 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 IL20RBQ6UXL0 311 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 ZNF227Q86WZ6 799 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 OFCC1Q8IZS5 231 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 ADAMTS16Q8TE57 1224 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 PAQR8Q8TEZ7 354 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 ARSGQ96EG1 525 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 FRMD6Q96NE9 622 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 POLR2J2Q9GZM3 115 aaKnown RBP13.87□□□□□ -0.19
CBWD1-225ENST00000616944 POLR2J3Q9H1A7 115 aaKnown RBP13.87□□□□□ -0.19
CBWD1-225ENST00000616944 CCDC86Q9H6F5 360 aaKnown RBP13.87□□□□□ -0.19
CBWD1-225ENST00000616944 NMNAT1Q9HAN9 279 aaPredicted RBP13.87□□□□□ -0.19
CBWD1-225ENST00000616944 MAN2C1Q9NTJ4 1040 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 ACER3Q9NUN7 267 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 TEKT2Q9UIF3 430 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 NTNG1Q9Y2I2 539 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 FAM32AQ9Y421 112 aaKnown RBP13.87□□□□□ -0.19
CBWD1-225ENST00000616944 TESMINQ9Y4I5 508 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 ZZEF1O43149 2961 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 NCKAP5O14513 1909 aa13.87□□□□□ -0.19
CBWD1-225ENST00000616944 H3BNH8 94 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 TP53I11O14683 189 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 SCO2O43819 266 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 THY1P04216 161 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 FREM3P0C091 2139 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 CASP3P42574 277 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 FOXK2Q01167 660 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 EPS8Q12929 822 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 PPP1R8Q12972 351 aaKnown RBP13.86□□□□□ -0.19
CBWD1-225ENST00000616944 SNTA1Q13424 505 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 ENTPD8Q5MY95 495 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 ZNF550Q7Z398 422 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 RANBP3LQ86VV4 465 aaPredicted RBP13.86□□□□□ -0.19
CBWD1-225ENST00000616944 MISPQ8IVT2 679 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 SPACA3Q8IXA5 215 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 GPALPP1Q8IXQ4 340 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 ZNF440Q8IYI8 595 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 LSMEM1Q8N8F7 131 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 ICA1LQ8NDH6 482 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 PIK3C3Q8NEB9 887 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 OR4C15Q8NGM1 316 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 SGCZQ96LD1 299 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 EPYCQ99645 322 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 MCHR1Q99705 422 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 CIB1Q99828 191 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 FUZQ9BT04 418 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 LAT2Q9GZY6 243 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 REEP1Q9H902 201 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 GALNT9Q9HCQ5 603 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 HPF1Q9NWY4 346 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 CNOT11Q9UKZ1 510 aaKnown RBP13.86□□□□□ -0.19
CBWD1-225ENST00000616944 ICAM5Q9UMF0 924 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 CARD8Q9Y2G2 431 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 U3KQV3 271 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 TNRC6AQ8NDV7 1962 aaKnown RBP13.86□□□□□ -0.19
CBWD1-225ENST00000616944 IGLV3-32A0A0A0MS00 114 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 A0A1W2PRQ8 180 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 AP3D1O14617 1153 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 EIF4E2O60573 245 aaKnown RBP13.86□□□□□ -0.19
CBWD1-225ENST00000616944 CCL3P10147 92 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 DNAJA1P31689 397 aaKnown RBP13.86□□□□□ -0.19
CBWD1-225ENST00000616944 HLCSP50747 726 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 SPIBQ01892 262 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 DGCR6Q14129 220 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 ABHD17BQ5VST6 288 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 CYP4Z1Q86W10 505 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 APLFQ8IW19 511 aaPredicted RBP13.86□□□□□ -0.19
CBWD1-225ENST00000616944 NR4A3Q92570 626 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 KLHDC3Q9BQ90 382 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 PROK2Q9HC23 129 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 CPNE5Q9HCH3 593 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 CTPS2Q9NRF8 586 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 STMN3Q9NZ72 180 aa13.86□□□□□ -0.19
CBWD1-225ENST00000616944 RHCGQ9UBD6 479 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms