RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 NRG3P56975 720 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 CD47Q08722 323 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 PMS2P3Q13401 168 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 SCARB2Q14108 478 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 KEAP1Q14145 624 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ESPL1Q14674 2120 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 EXOSC7Q15024 291 aaKnown RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 INAQ16352 499 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF630Q2M218 657 aaPredicted RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 CTU2Q2VPK5 515 aaKnown RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF766Q5HY98 468 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF468Q5VIY5 522 aaPredicted RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 SAXO2Q658L1 398 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 SPINK14Q6IE38 97 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 SLC25A25Q6KCM7 469 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 KCTD8Q6ZWB6 473 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 PRICKLE2Q7Z3G6 844 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF605Q86T29 641 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 SLC30A8Q8IWU4 369 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 DND1Q8IYX4 353 aaKnown RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 CYP4Z2PQ8N1L4 340 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF441Q8N8Z8 693 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 TMEM178AQ8NBL3 297 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 OR52R1Q8NGF1 315 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF420Q8TAQ5 688 aaPredicted RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 OR5P2Q8WZ92 322 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF566Q969W8 418 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ADIPOR1Q96A54 375 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ELP4Q96EB1 424 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 HSPBAP1Q96EW2 488 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 SGCZQ96LD1 299 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 C5orf34Q96MH7 638 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 SIGLEC12Q96PQ1 595 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 GAL3ST4Q96RP7 486 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 EPYCQ99645 322 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 DOK1Q99704 481 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 CXorf36Q9H7Y0 433 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 REEP1Q9H902 201 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 ANKRD10Q9NXR5 420 aa8.12□□□□□ -1.11
SMAD4-217ENST00000611848 C19orf53Q9UNZ5 99 aaPredicted RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 SAMHD1Q9Y3Z3 626 aaKnown RBP8.12□□□□□ -1.11
SMAD4-217ENST00000611848 TRIM64BA6NI03 449 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 M0QX08 132 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 BCKDKO14874 412 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SLC28A2O43868 658 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 MITFO75030 526 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 TRMUO75648 421 aaKnown RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SLC25A12O75746 678 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 DIRAS1O95057 198 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 NADKO95544 446 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SP1P08047 785 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 DCKP27707 260 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 PTGER1P34995 402 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 CHI3L1P36222 383 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SOX3P41225 446 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 MC3RP41968 323 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 PPICP45877 212 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 EMDP50402 254 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 NR0B1P51843 470 aaKnown RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 PCBP3P57721 371 aaKnown RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 PSPHP78330 225 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 CDK6Q00534 326 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 DUSP8Q13202 625 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 RAB39AQ14964 217 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 COLEC12Q5KU26 742 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 FHL5Q5TD97 284 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 XAF1Q6GPH4 301 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 TMEM107Q6UX40 140 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 IL20RBQ6UXL0 311 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 C16orf47Q6ZP98 133 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 RNF130Q86XS8 419 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 OR2L13Q8N349 312 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 OR7G2Q8NG99 324 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 PSMA8Q8TAA3 256 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 TAMM41Q96BW9 452 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 ISOC1Q96CN7 298 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 NEURL3Q96EH8 262 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SCMH1Q96GD3 660 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 TPD52L3Q96J77 140 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 LCORQ96JN0 433 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF347Q96SE7 839 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 TIMMDC1Q9NPL8 285 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 THUMPD1Q9NXG2 353 aaKnown RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 NDUFAF4Q9P032 175 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 PDP1Q9P0J1 537 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 LUZP4Q9P127 313 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 BLOC1S6Q9UL45 172 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 PCDHGB3Q9Y5G1 929 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 EXPH5Q8NEV8 1989 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 POLEQ07864 2286 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 DNAJC13O75165 2243 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 TTC36A6NLP5 189 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF354AO60765 605 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SEC14L2O76054 403 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 IFNA14P01570 189 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 FBXO45P0C2W1 286 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 CCDC159P0C7I6 412 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 IL7RP16871 459 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 DRD5P21918 477 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 AQP1P29972 269 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms