RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 PSD4Q8NDX1 1056 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 OR51Q1Q8NH59 317 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 CLDN23Q96B33 292 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 BPIFA2Q96DR5 249 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 SAMD8Q96LT4 415 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 OR1F2PQ96R84 312 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 MROQ9BYG7 248 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 OR52D1Q9H346 318 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 UBQLN3Q9H347 655 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 ERVMER34-1Q9H9K5 563 aa11.06□□□□□ -0.64
USP6NL-206ENST00000609853 FAM86C2PA6NEL3 165 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 EFCAB7A8K855 629 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 ZNF670-ZNF695F2Z2N8 137 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 CDC42EP2O14613 210 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 DYRK3O43781 588 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 NUDT21O43809 227 aaKnown RBP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 PIP5K1CO60331 668 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 HCN1O60741 890 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 GPX5O75715 221 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 PIAS2O75928 621 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 MED26O95402 600 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 IFI30P13284 250 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 MAOBP27338 520 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 TGFBR1P36897 503 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 ETV5P41161 510 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 ETV6P41212 452 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 CRYBB2P43320 205 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 PPM1FP49593 454 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 ETV1P50549 477 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 AFF3P51826 1226 aaKnown RBP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 HSD11B2P80365 405 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 ACSM1Q08AH1 577 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 FGFBP1Q14512 234 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 ZNF267Q14586 743 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 CCDC85BQ15834 202 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 DEFB133Q30KQ1 61 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 WDR45BQ5MNZ6 344 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 PDZK1Q5T2W1 519 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 MEX3DQ86XN8 651 aaKnown RBP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 PLXDC1Q8IUK5 500 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 ZNF440Q8IYI8 595 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 GALNT6Q8NCL4 622 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 FANK1Q8TC84 345 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 DOK4Q8TEW6 326 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 AHCYL2Q96HN2 611 aaKnown RBP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 CCNL2Q96S94 520 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 COQ7Q99807 217 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 ZNF426Q9BUY5 554 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 FOXQ1Q9C009 403 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 HOXD1Q9GZZ0 328 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 OR10A5Q9H207 317 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 DNAJB12Q9NXW2 375 aaKnown RBP11.05□□□□□ -0.64
USP6NL-206ENST00000609853 GMEB2Q9UKD1 530 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 GPR52Q9Y2T5 361 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 UGT2A1Q9Y4X1 527 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 CLDN16Q9Y5I7 305 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 SPAG17Q6Q759 2223 aa11.05□□□□□ -0.64
USP6NL-206ENST00000609853 NPIPA5A0A0B4J1W7 369 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SYNDIG1LA6NDD5 238 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 NPIPA7E9PJI5 369 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 TGFBR3LH3BV60 316 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 IGHA1P01876 353 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 TSPAN19P0C672 248 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 MSL3P1P0C860 447 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 NPIPA8P0DM63 369 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SPTBP11277 2137 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CD1CP29017 333 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SSTR4P31391 388 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SOX3P41225 446 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 GFERP55789 205 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 GPLD1P80108 840 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 OXA1LQ15070 435 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 ZNF181Q2M3W8 571 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 TRIM16LQ309B1 348 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 PLK5Q496M5 336 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 YOD1Q5VVQ6 348 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 ULK3Q6PHR2 472 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SMARCD3Q6STE5 483 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 KMT5CQ86Y97 462 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SLITRK4Q8IW52 837 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SHISA5Q8N114 240 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 RCBTB1Q8NDN9 531 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CNOT9Q92600 299 aaKnown RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 UFD1Q92890 307 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 LRFN5Q96NI6 719 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 IER2Q9BTL4 223 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 ASPNQ9BXN1 380 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 RBCK1Q9BYM8 510 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 DPH1Q9BZG8 443 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 C6orf62Q9GZU0 229 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 NUAK2Q9H093 628 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 DUSP15Q9H1R2 295 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SEMA5BQ9P283 1151 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 LRIT1Q9P2V4 623 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CBLCQ9ULV8 474 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 TP53BP1Q12888 1972 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 hCG_2014768A0A024R1R8 64 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 A0A1B0GWA3 101 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 TMEM150CB9EJG8 249 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms