RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 GINS1Q14691 196 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 C21orf62-AS1Q17RA5 79 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 ZNF181Q2M3W8 571 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 ZNF791Q3KP31 576 aaPredicted RBP9.16□□□□□ -0.94
CTCFL-222ENST00000609232 ARMC4Q5T2S8 1044 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 UBE3DQ7Z6J8 389 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 NKAIN4Q8IVV8 208 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 CAMKVQ8NCB2 501 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 TMEM52Q8NDY8 209 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 OR10H4Q8NGA5 316 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 OR5M1Q8NGP8 315 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 OR5K1Q8NHB7 308 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 OR5P2Q8WZ92 322 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 ZNF607Q96SK3 696 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 MCHR1Q99705 422 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 OR51E2Q9H255 320 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 ANKHQ9HCJ1 492 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 TM9SF3Q9HD45 589 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 NDUFAF4Q9P032 175 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 PCOLCE2Q9UKZ9 415 aa9.16□□□□□ -0.94
CTCFL-222ENST00000609232 FAM25AB3EWG3 89 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 FAM25CB3EWG5 89 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 FAM25GB3EWG6 89 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 RGS13O14921 159 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 ARHGEF9O43307 516 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 RGS10O43665 173 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 FGF17O60258 216 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 HCN1O60741 890 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 DNAJB5O75953 348 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 PTTG1O95997 202 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 WNT1P04628 370 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 KRT20P35900 424 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 NUDT1P36639 197 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 CSNK2BP67870 215 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 CDC20Q12834 499 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 ATAD3CQ5T2N8 411 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 AGAP6Q5VW22 663 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 SETD9Q8NE22 299 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 OR4K5Q8NGD3 323 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 AGAP4Q96P64 663 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 ZFYVE21Q9BQ24 234 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 BEX2Q9BXY8 128 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 BEX1Q9HBH7 125 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 KLHL28Q9NXS3 571 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 TNFRSF10DQ9UBN6 386 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 PFDN2Q9UHV9 154 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 VDAC3Q9Y277 283 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 SPACA6W5XKT8 324 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.15□□□□□ -0.94
CTCFL-222ENST00000609232 ABCA1O95477 2261 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 RELNP78509 3460 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 PROM1O43490 865 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 PRICKLE3O43900 615 aaPredicted RBP9.15□□□□□ -0.94
CTCFL-222ENST00000609232 DNAJA1P31689 397 aaKnown RBP9.15□□□□□ -0.94
CTCFL-222ENST00000609232 FNTBP49356 437 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 STARD6P59095 220 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 CTAG1AP78358 180 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 NSDHLQ15738 373 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 TSTQ16762 297 aaKnown RBP9.15□□□□□ -0.94
CTCFL-222ENST00000609232 FBXO42Q6P3S6 717 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 TUBA3EQ6PEY2 450 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 LAPTM4BQ86VI4 370 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 PAQR7Q86WK9 346 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 TOR1AIP2Q8NFQ8 470 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 OR4K14Q8NGD5 310 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 OR52N2Q8NGI0 321 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 MAFAQ8NHW3 353 aaPredicted RBP9.15□□□□□ -0.94
CTCFL-222ENST00000609232 DYNC2LI1Q8TCX1 351 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 TSSK6Q9BXA6 273 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 DDX31Q9H8H2 851 aaKnown RBP9.15□□□□□ -0.94
CTCFL-222ENST00000609232 C3orf14Q9HBI5 128 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 LHX9Q9NQ69 397 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 POLHQ9Y253 713 aa9.15□□□□□ -0.94
CTCFL-222ENST00000609232 PHF3Q92576 2039 aaKnown RBP9.15□□□□□ -0.95
CTCFL-222ENST00000609232 SHISA8B8ZZ34 492 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 OR2B3O76000 313 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 ALX3O95076 343 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 IGLV3-19P01714 112 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 UQCRC2P22695 453 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 ACVR1BP36896 505 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 RUNX2Q13950 521 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.95
CTCFL-222ENST00000609232 ZNF425Q6IV72 752 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 OR7G2Q8NG99 324 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 OR5M11Q96RB7 305 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 IFT27Q9BW83 186 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 RPS6KB2Q9UBS0 482 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 FTSJ1Q9UET6 329 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 ATPIF1Q9UII2 106 aa9.15□□□□□ -0.95
CTCFL-222ENST00000609232 A0A1W2PQ72 361 aa9.14□□□□□ -0.95
CTCFL-222ENST00000609232 PRR19A6NJB7 356 aa9.14□□□□□ -0.95
CTCFL-222ENST00000609232 LOC110117498-PIK3R3F6TDL0 507 aa9.14□□□□□ -0.95
CTCFL-222ENST00000609232 H1F0P07305 194 aaKnown RBP9.14□□□□□ -0.95
CTCFL-222ENST00000609232 RETP07949 1114 aa9.14□□□□□ -0.95
CTCFL-222ENST00000609232 ZNF10P21506 573 aaPredicted RBP9.14□□□□□ -0.95
CTCFL-222ENST00000609232 UGT2B15P54855 530 aa9.14□□□□□ -0.95
CTCFL-222ENST00000609232 HNRNPKP61978 463 aaKnown RBP eCLIP9.14□□□□□ -0.951e-6■■■■□ 23.8
CTCFL-222ENST00000609232 CDK5R2Q13319 367 aa9.14□□□□□ -0.95
CTCFL-222ENST00000609232 FZD5Q13467 585 aa9.14□□□□□ -0.95
CTCFL-222ENST00000609232 PTGES3Q15185 160 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms