RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	GP6	Q9HCN6	339 aa		18.69	■□□□□ 0.58
NECAB3-222	ENST00000607805	ACSS1	Q9NUB1	689 aa	Predicted RBP	18.69	■□□□□ 0.58
NECAB3-222	ENST00000607805	PTGDR2	Q9Y5Y4	395 aa		18.69	■□□□□ 0.58
NECAB3-222	ENST00000607805	URI1	O94763	535 aa	Predicted RBP	18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	PROC	P04070	461 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	PABPC4L	P0CB38	370 aa	Known RBP	18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	UROS	P10746	265 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	MYL2	P10916	166 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	ME2	P23368	584 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	ELK4	P28324	431 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	ADH6	P28332	368 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	GPC1	P35052	558 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	IDUA	P35475	653 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	EIF1	P41567	113 aa	Known RBP	18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	PRKAG1	P54619	331 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	VEZF1	Q14119	521 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	RNPS1	Q15287	305 aa	Known RBP	18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	PGGHG	Q32M88	737 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	ZCCHC12	Q6PEW1	402 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	TUSC5	Q8IXB3	177 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	B4GALNT2	Q8NHY0	566 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	ZFP28	Q8NHY6	868 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	HSD17B8	Q92506	261 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	CPNE4	Q96A23	557 aa	Predicted RBP	18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	ZBED6CL	Q96FA7	236 aa	Predicted RBP	18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	CCT7	Q99832	543 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	TACO1	Q9BSH4	297 aa	Known RBP	18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	SLCO5A1	Q9H2Y9	848 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	REEP4	Q9H6H4	257 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	COQ10B	Q9H8M1	238 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	C1orf109	Q9NX04	203 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	KLHL13	Q9P2N7	655 aa		18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	MAGED1	Q9Y5V3	778 aa	Predicted RBP	18.68	■□□□□ 0.58
NECAB3-222	ENST00000607805	NTN1	O95631	604 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	SDC1	P18827	310 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	SFTPD	P35247	375 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	ZNF117	Q03924	483 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	FOXF1	Q12946	379 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	ZNF672	Q499Z4	452 aa	Predicted RBP	18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	RNF165	Q6ZSG1	346 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	OR2T11	Q8NH01	316 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	PIWIL2	Q8TC59	973 aa	Known RBP	18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	SMAP2	Q8WU79	429 aa	Predicted RBP	18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	TRMT61A	Q96FX7	289 aa	Known RBP	18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	REPIN1	Q9BWE0	567 aa	Known RBP	18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	TXLNGY	Q9BZA5	131 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	LRTM1	Q9HBL6	345 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	SIRT3	Q9NTG7	399 aa	Predicted RBP	18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	ING1	Q9UK53	422 aa	Predicted RBP	18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805	ACTL7B	Q9Y614	415 aa		18.67	■□□□□ 0.58
NECAB3-222	ENST00000607805		A0A1W2PPM1	405 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	ZNF814	B7Z6K7	855 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	SCD	O00767	359 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	OIP5	O43482	229 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	HSPA4L	O95757	839 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	CD8A	P01732	235 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	IGHV4-39	P01824	125 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	CD3E	P07766	207 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	ACVR1B	P36896	505 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	CDKN1A	P38936	164 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	SERPINB4	P48594	390 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	TMEM201	Q5SNT2	666 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	CCNJ	Q5T5M9	372 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	CLEC6A	Q6EIG7	209 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	CBLN3	Q6UW01	205 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	ZNF524	Q96C55	264 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	PPCDC	Q96CD2	204 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	FAM120B	Q96EK7	910 aa	Known RBP	18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	BTBD2	Q9BX70	525 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	TRIM2	Q9C040	744 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	GRIP2	Q9C0E4	1043 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	TUBB1	Q9H4B7	451 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	ESRP2	Q9H6T0	727 aa	Known RBP	18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	DUSP22	Q9NRW4	184 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	OXSM	Q9NWU1	459 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	ICAM5	Q9UMF0	924 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	LIPT1	Q9Y234	373 aa		18.66	■□□□□ 0.58
NECAB3-222	ENST00000607805	DPRX	A6NFQ7	191 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	AKAP10	O43572	662 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	CD5L	O43866	347 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	PLIN3	O60664	434 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	GLRA3	O75311	464 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	YES1	P07947	543 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	ALOX5	P09917	674 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	BSPH1	Q075Z2	132 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	MLC1	Q15049	377 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	P2RY6	Q15077	328 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	FCRLA	Q7L513	359 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	MTERF4	Q7Z6M4	381 aa	Known RBP	18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	TDRP	Q86YL5	185 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	HIPK1	Q86Z02	1210 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	COX18	Q8N8Q8	333 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	FBXO27	Q8NI29	283 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	OTUB1	Q96FW1	271 aa	Predicted RBP	18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	TSSK3	Q96PN8	268 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	STAC	Q99469	402 aa		18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	USB1	Q9BQ65	265 aa	Known RBP	18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	IQCG	Q9H095	443 aa	Known RBP	18.65	■□□□□ 0.58
NECAB3-222	ENST00000607805	NGB	Q9NPG2	151 aa		18.65	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms