RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 PGM3O95394 542 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 OTCP00480 354 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ZNF23P17027 643 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 IGHV1-2P23083 117 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ELK4P28324 431 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SHC1P29353 583 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 APOBEC3AP31941 199 aaPredicted RBP13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 GABRA3P34903 492 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SLC29A2Q14542 456 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 MMGT1Q8N4V1 131 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 POC1BQ8TC44 478 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 GPR151Q8TDV0 419 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 FOXN4Q96NZ1 517 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 LMF2Q9BU23 707 aaKnown RBP13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 FKRPQ9H9S5 495 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 BCO1Q9HAY6 547 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 TMCO1Q9UM00 188 aa13.55□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 IGHV3-15A0A0B4J1V0 119 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 GXYLT2A0PJZ3 443 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 TTC36A6NLP5 189 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 CCT8L1PA6NM43 557 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 C9JVG2 144 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 STX16-NPEPL1H3BU86 382 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 UPK1AO00322 258 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 STX16O14662 325 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SMAD9O15198 467 aaKnown RBP13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SMIM24O75264 130 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 OXSR1O95747 527 aaPredicted RBP13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 NUDT14O95848 222 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 GSTA2P09210 222 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 COX5AP20674 150 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 RASGEF1BQ0VAM2 473 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 TMEM176BQ3YBM2 270 aaPredicted RBP13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 PDLIM3Q53GG5 364 aaPredicted RBP13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 GLE1Q53GS7 698 aaKnown RBP13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 MISPQ8IVT2 679 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 UBE2J2Q8N2K1 259 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ZNF433Q8N7K0 673 aaPredicted RBP13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 CDC26Q8NHZ8 85 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ZFP90Q8TF47 636 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 C16orf78Q8WTQ4 265 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 PIK3R3Q92569 461 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ZNF775Q96BV0 537 aaPredicted RBP13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 FBXO17Q96EF6 278 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 PSD2Q9BQI7 771 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 CXorf36Q9H7Y0 433 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SNX12Q9UMY4 172 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SNX24Q9Y343 169 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 MALRD1Q5VYJ5 2156 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ALPK2Q86TB3 2170 aa13.54□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 A0A096LPK6 155 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 A0A1W2PR80 420 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 MYO1GB0I1T2 1018 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 EIF3HO15372 352 aaKnown RBP eCLIP13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 RGS14O43566 566 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 VENTXO95231 258 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 IGKV1D-16P01601 117 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 HSD3B1P14060 373 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ENPP1P22413 925 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 HSD3B2P26439 372 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SLC7A1P30825 629 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 NTSP30990 170 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 COMPP49747 757 aaPredicted RBP13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ACSM2AQ08AH3 577 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 FOXF1Q12946 379 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 VPS26BQ4G0F5 336 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SPIN4Q56A73 249 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 MROH9Q5TGP6 573 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ACSM2BQ68CK6 577 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 LETMD1Q6P1Q0 360 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 GALNT5Q7Z7M9 940 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 OR2L13Q8N349 312 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SLC35F6Q8N357 371 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 ATP6V1C2Q8NEY4 427 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 OR4C3Q8NH37 302 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 B4GALNT2Q8NHY0 566 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 SORCS2Q96PQ0 1159 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 BPESC1Q9GZL8 116 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 EQTNQ9NQ60 294 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 MIEF1Q9NQG6 463 aa13.53□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 PCNX3Q9H6A9 2034 aa13.52□□□□□ -0.24
NEDD8-MDP1-204ENST00000605847 KIF2AO00139 706 aaPredicted RBP13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SCDO00767 359 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ZNF195O14628 629 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 PSMG1O95456 288 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 KRT6AP02538 564 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 KRT6BP04259 564 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 NGFRP08138 427 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 RBP1P09455 135 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 LINGO3P0C6S8 592 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 DDCP20711 480 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 PCMT1P22061 227 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TYK2P29597 1187 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 STX2P32856 288 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 KRT6CP48668 564 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SNRPD2P62316 118 aaKnown RBP13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 PHC1P78364 1004 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 CALCOCO2Q13137 446 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SCGB2A2Q13296 93 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms