RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 NDUFAF4Q9P032 175 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 COPS7AQ9UBW8 275 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 NDRG4Q9ULP0 352 aaKnown RBP16■□□□□ 0.15
PPFIA3-207ENST00000602716 CBLCQ9ULV8 474 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 OR10H1Q9Y4A9 318 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 GMPPBQ9Y5P6 360 aa16■□□□□ 0.15
PPFIA3-207ENST00000602716 MRPS18BQ9Y676 258 aaKnown RBP16■□□□□ 0.15
PPFIA3-207ENST00000602716 LOC102723996A0A087X1L8 192 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 IFNA14P01570 189 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 COX6A1P12074 109 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 RPS4Y1P22090 263 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 FOLR3P41439 243 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 MAP2K4P45985 399 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 PSMD7P51665 324 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 SLC26A5P58743 744 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 KCNC4Q03721 635 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF836Q6ZNA1 936 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 PIWIL3Q7Z3Z3 882 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF619Q8N2I2 560 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 CLIP4Q8N3C7 705 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF441Q8N8Z8 693 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 OR52P1PQ8NH57 321 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 THAP3Q8WTV1 239 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 GEMIN6Q8WXD5 167 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 ADAMTS14Q8WXS8 1223 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 YIPF6Q96EC8 236 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 SH3YL1Q96HL8 342 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 ART5Q96L15 291 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 APOL4Q9BPW4 351 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 SEMA4CQ9C0C4 833 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 SAP130Q9H0E3 1048 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 PDP1Q9P0J1 537 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 AASSQ9UDR5 926 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 TCFL5Q9UL49 500 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 FREM2Q5SZK8 3169 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 SOCS6O14544 535 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 TERTO14746 1132 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 RAD1O60671 282 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF354AO60765 605 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 SERPINB7O75635 380 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 UGT2B17O75795 530 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 CCNYL3P0C7X3 344 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 IDUAP35475 653 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 STAT5AP42229 794 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 IL1RL1Q01638 556 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF311Q5JNZ3 666 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 KIRREL2Q6UWL6 708 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 LPAR4Q99677 370 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 CHCHD3Q9NX63 227 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 SCN3BQ9NY72 215 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 PPIEQ9UNP9 301 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF443Q9Y2A4 671 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 PADI2Q9Y2J8 665 aa15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 SAMHD1Q9Y3Z3 626 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-207ENST00000602716 IGHV1-45A0A0A0MS14 117 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 TRBV11-1A0A0K0K1C0 115 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 LOC101059948A0A1B0GTJ6 334 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 C2orf92A0A1B0GVN3 265 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 FRG2CA6NGY1 282 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 AGAP5A6NIR3 686 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 SLC22A1O15245 554 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 MAN1A2O60476 641 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 PPICP45877 212 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 MASP1P48740 699 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 NR0B1P51843 470 aaKnown RBP15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 ATP1A4Q13733 1029 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 MAD2L1BPQ15013 274 aaPredicted RBP15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 RGS21Q2M5E4 152 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 FLYWCH1Q4VC44 716 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 SYT6Q5T7P8 510 aaPredicted RBP15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 FAHD1Q6P587 224 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 PPP1R32Q7Z5V6 425 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 NLGN4XQ8N0W4 816 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 NLGN4YQ8NFZ3 816 aaPredicted RBP15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF354BQ96LW1 612 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 C19orf25Q9UFG5 118 aaPredicted RBP15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 CDV3Q9UKY7 258 aaKnown RBP15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 PCDHGB3Q9Y5G1 929 aa15.98■□□□□ 0.15
PPFIA3-207ENST00000602716 FUOMA2VDF0 154 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 TMEM200CA6NKL6 621 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 CLDN25C9JDP6 229 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 E9PQ18 207 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 BOLA2-SMG1P6H3BVE0 249 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 DPM1O60762 260 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 AK1P00568 194 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 EPHA2P29317 976 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 RNF4P78317 190 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 HOXC5Q00444 222 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 ITGADQ13349 1161 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 DNASE1L3Q13609 305 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 IL10RAQ13651 578 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF846Q147U1 533 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 LINC00299Q6ZSB3 139 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 ESX1Q8N693 406 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 TMCO5AQ8N6Q1 288 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 VMP1Q96GC9 406 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 LCORQ96JN0 433 aaPredicted RBP15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 PITX2Q99697 317 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 PRR14Q9BWN1 585 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 AKIP1Q9NQ31 210 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms