RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 CCDC86Q9H6F5 360 aaKnown RBP14.23□□□□□ -0.13
UPF1-204ENST00000596842 WDR26Q9H7D7 661 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 SCPEP1Q9HB40 452 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 FGF20Q9NP95 211 aaPredicted RBP14.23□□□□□ -0.13
UPF1-204ENST00000596842 GPR34Q9UPC5 381 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 C17orf113A0A1B0GUU1 675 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 A0A1W2PPV9 198 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 IRGMA1A4Y4 181 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 LILRB3O75022 631 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 EFCAB14O75071 495 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 ADH1CP00326 375 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 FOSL1P15407 271 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 PPM1FP49593 454 aaPredicted RBP14.23□□□□□ -0.13
UPF1-204ENST00000596842 ZNF81P51508 661 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 GAS1P54826 345 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 HTRA3P83110 453 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 SLC25A35Q3KQZ1 300 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 FAM111BQ6SJ93 734 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 TRMT10AQ8TBZ6 339 aaKnown RBP14.23□□□□□ -0.13
UPF1-204ENST00000596842 FANK1Q8TC84 345 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 CAMK1GQ96NX5 476 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 UBQLN3Q9H347 655 aa14.23□□□□□ -0.13
UPF1-204ENST00000596842 LRRC72A6NJI9 287 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 RNF13O43567 381 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 DHFRP00374 187 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 POU3F3P20264 500 aaPredicted RBP14.22□□□□□ -0.13
UPF1-204ENST00000596842 ATP12AP54707 1039 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 OR2A1Q8NGT9 310 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 OR10G6Q8NH81 332 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 ACOT11Q8WXI4 607 aaPredicted RBP14.22□□□□□ -0.13
UPF1-204ENST00000596842 MCOLN1Q9GZU1 580 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 PELI2Q9HAT8 420 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 A0A1W2PP55 124 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 EMC8O43402 210 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 SNRPBP14678 240 aaKnown RBP14.22□□□□□ -0.13
UPF1-204ENST00000596842 ATP5A1P25705 553 aaKnown RBP14.22□□□□□ -0.13
UPF1-204ENST00000596842 NAA10P41227 235 aaPredicted RBP14.22□□□□□ -0.13
UPF1-204ENST00000596842 OMPP47874 163 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 PRPF38BQ5VTL8 546 aaKnown RBP14.22□□□□□ -0.13
UPF1-204ENST00000596842 ARL14Q8N4G2 192 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 ZNF433Q8N7K0 673 aaPredicted RBP14.22□□□□□ -0.13
UPF1-204ENST00000596842 GON7Q9BXV9 100 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 GSDMCQ9BYG8 508 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 KCNN2Q9H2S1 579 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 WASH6PQ9NQA3 447 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 C20orf141Q9NUB4 165 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 EIF3KQ9UBQ5 218 aaKnown RBP14.22□□□□□ -0.13
UPF1-204ENST00000596842 CBLCQ9ULV8 474 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 ING4Q9UNL4 249 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 HLA-DMAP28067 261 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 OR12D2P58182 307 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 MLF2Q15773 248 aaPredicted RBP14.22□□□□□ -0.13
UPF1-204ENST00000596842 DEFB115Q30KQ5 88 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 LYPD4Q6UWN0 246 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 OR52E1Q8NGJ3 308 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 OR13C2Q8NGS9 318 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 OR5W2Q8NH69 310 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 SLC35A4Q96G79 324 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 C4orf36Q96KX1 117 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 FUZQ9BT04 418 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 DPP7Q9UHL4 492 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 PCDHGB7Q9Y5F8 929 aa14.22□□□□□ -0.13
UPF1-204ENST00000596842 ZNF106Q9H2Y7 1883 aaKnown RBP14.21□□□□□ -0.13
UPF1-204ENST00000596842 COL4A6Q14031 1691 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 DENND4CQ5VZ89 1909 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 A0A0A6YYD5 115 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 POM121CA8CG34 1229 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 PROM1O43490 865 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 RGS9O75916 674 aaPredicted RBP14.21□□□□□ -0.13
UPF1-204ENST00000596842 OR5F1O95221 314 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 C1QBP02746 253 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 MT-ND4P03905 459 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 DRD2P14416 443 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 PKLRP30613 574 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 ACSL1P33121 698 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 CLDN20P56880 219 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 METRNLQ641Q3 311 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 SFRP4Q6FHJ7 346 aaPredicted RBP14.21□□□□□ -0.13
UPF1-204ENST00000596842 SERPINA12Q8IW75 414 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 TOMM5Q8N4H5 51 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 OR56A1Q8NGH5 318 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 LILRB1Q8NHL6 650 aaPredicted RBP14.21□□□□□ -0.13
UPF1-204ENST00000596842 MS4A6EQ96DS6 147 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 RSPRY1Q96DX4 576 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 ELP4Q96EB1 424 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 B3GNT4Q9C0J1 378 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 PRKAG2Q9UGJ0 569 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 PPIEQ9UNP9 301 aaKnown RBP14.21□□□□□ -0.13
UPF1-204ENST00000596842 TRAV20A0A0B4J274 112 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 EDDM13A0A1B0GTR0 161 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 TSPAN11A1L157 253 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 PRR23D1E9PI22 279 aaPredicted RBP14.21□□□□□ -0.13
UPF1-204ENST00000596842 SLC9A3R1O14745 358 aaPredicted RBP14.21□□□□□ -0.13
UPF1-204ENST00000596842 TRAPPC2P0DI81 140 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 TRAPPC2BP0DI82 140 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 PRR23D2P0DMB1 279 aaPredicted RBP14.21□□□□□ -0.13
UPF1-204ENST00000596842 LAMP2P13473 410 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 GRPRP30550 384 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 RAB28P51157 221 aa14.21□□□□□ -0.13
UPF1-204ENST00000596842 ZNF658BQ4V348 819 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms