RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZNF41P51814 821 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-221ENST00000593026 SUMO3P55854 103 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-221ENST00000593026 KCNJ10P78508 379 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 RBBP4Q09028 425 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 ADRM1Q16186 407 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.56□□□□□ -0.24
DDX39A-221ENST00000593026 EIF2S3LQ2VIR3 472 aaKnown RBP13.56□□□□□ -0.24
DDX39A-221ENST00000593026 NDUFAF6Q330K2 333 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 LIN52Q52LA3 116 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 CBLN3Q6UW01 205 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 HACD2Q6Y1H2 254 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 NET1Q7Z628 596 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-221ENST00000593026 FGD2Q7Z6J4 655 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 IFNEQ86WN2 208 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 PTOV1Q86YD1 416 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 FITM2Q8N6M3 262 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 HIPK4Q8NE63 616 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 WDR60Q8WVS4 1066 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 SARAFQ96BY9 339 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 SPATA9Q9BWV2 254 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 ARL8BQ9NVJ2 186 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 TAGLN3Q9UI15 199 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 ANGPT4Q9Y264 503 aa13.56□□□□□ -0.24
DDX39A-221ENST00000593026 RPH3AQ9Y2J0 694 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-221ENST00000593026 CLDN24A6NM45 220 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 FAM47E-STBD1D6RA91 191 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 NPIPA2E9PIF3 369 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 NPIPA3F8WFD2 350 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 PRRG2O14669 202 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 BCKDKO14874 412 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 ZIC3O60481 467 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 NUDT14O95848 222 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 TPOP07202 933 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 UBTFL6P0CB48 400 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-221ENST00000593026 NID1P14543 1247 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 CPA2P48052 419 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 CCR4P51679 360 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 CASP6P55212 293 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 SKP2Q13309 424 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 LARS2Q15031 903 aaKnown RBP13.55□□□□□ -0.24
DDX39A-221ENST00000593026 RAET1LQ5VY80 246 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 ARSKQ6UWY0 536 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 KRT73Q86Y46 540 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 SLC30A8Q8IWU4 369 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 CMIPQ8IY22 773 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 ZZZ3Q8IYH5 903 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 TOR1AIP2Q8NFQ8 470 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 OR52P1PQ8NH57 321 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 FAM57AQ8TBR7 257 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 SFXN2Q96NB2 322 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 HOPXQ9BPY8 73 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-221ENST00000593026 GPATCH1Q9BRR8 931 aaKnown RBP13.55□□□□□ -0.24
DDX39A-221ENST00000593026 LAT2Q9GZY6 243 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 PIF1Q9H611 641 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 SPRR3Q9UBC9 169 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 TNFRSF10DQ9UBN6 386 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 ACAD8Q9UKU7 415 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 ICAM5Q9UMF0 924 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF232Q9UNY5 417 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 VDAC3Q9Y277 283 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF835Q9Y2P0 537 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 SLC6A5Q9Y345 797 aa13.55□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF407Q9C0G0 2248 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 A0A087WZY1 265 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 TRGV8A0A0C4DH27 118 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 THBS1P07996 1170 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 STSP08842 583 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 ETS2P15036 469 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 AQP1P29972 269 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 PCGF2P35227 344 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 PGM1P36871 562 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 GZMMP51124 257 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 CBFBQ13951 182 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 MRPL2Q5T653 305 aaKnown RBP13.54□□□□□ -0.24
DDX39A-221ENST00000593026 WLSQ5T9L3 541 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 AAGABQ6PD74 315 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 Q6ZPB1 254 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-221ENST00000593026 CD163Q86VB7 1156 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 CALHM3Q86XJ0 350 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 VRK2Q86Y07 508 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 FAM71CQ8NEG0 241 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 OR5W2Q8NH69 310 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 ABTB1Q969K4 478 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF607Q96SK3 696 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 KLHDC3Q9BQ90 382 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 SPATA5L1Q9BVQ7 753 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 MED17Q9NVC6 651 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 SH3BGRL2Q9UJC5 107 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF443Q9Y2A4 671 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-221ENST00000593026 AP3M1Q9Y2T2 418 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 IFT52Q9Y366 437 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 ZGRF1Q86YA3 2104 aa13.54□□□□□ -0.24
DDX39A-221ENST00000593026 RP1L1Q8IWN7 2480 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 BCAS1O75363 584 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 ACTL6AO96019 429 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 FREM3P0C091 2139 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 PABPC4LP0CB38 370 aaKnown RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 BMP7P18075 431 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 CHMP24386 653 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms