RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ACTR10Q9NZ32 417 aa16.02■□□□□ 0.15
SMARCA4-215ENST00000590574 CPMP14384 443 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 GIFP27352 417 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 EIF1AXP47813 144 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 DEFA5Q01523 94 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 MRPL2Q5T653 305 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 TECPR1Q7Z6L1 1165 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 LRRC56Q8IYG6 542 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 FTMTQ8N4E7 242 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 PTCHD1Q96NR3 888 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 SPNS1Q9H2V7 528 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 C12orf4Q9NQ89 552 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 PRSS16Q9NQE7 514 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 SEMA4GQ9NTN9 838 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 NOP16Q9Y3C1 178 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 SGK494L7N484 410 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 SMCO1Q147U7 214 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 FAM78AQ5JUQ0 283 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 TCTN3Q6NUS6 607 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 OR2T35Q8NGX2 323 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 FGF13Q92913 245 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 ATG5Q9H1Y0 275 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 OR2AT4A6NND4 320 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 MT-ND4P03905 459 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 ZNF20P17024 532 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 NXNL2Q5VZ03 156 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 LRRN1Q6UXK5 716 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 MFSD4AQ8N468 514 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 LMX1AQ8TE12 382 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 NEDD4LQ96PU5 975 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 NPIPA5E9PKD4 350 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 TMPRSS11DO60235 418 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 CREBL2O60519 120 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 RBMS1P29558 406 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 NRG3P56975 720 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 ZNF77Q15935 545 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 GDF7Q7Z4P5 450 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 C10orf111Q8N326 155 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 OR2L3Q8NG85 312 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 PPP1R14AQ96A00 147 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 OR6C2Q9NZP2 312 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 NPIPA1Q9UND3 350 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 YARS2Q9Y2Z4 477 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 PCDHGA3Q9Y5H0 932 aa16.01■□□□□ 0.15
SMARCA4-215ENST00000590574 LIM2P55344 173 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 GON7Q9BXV9 100 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 SH2B3Q9UQQ2 575 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 CCKBRP32239 447 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 DDOSTP39656 456 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 CTBP2P56545 445 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 SERPINA12Q8IW75 414 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 DEFB119Q8N690 84 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 SNX18Q96RF0 628 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 ORAI3Q9BRQ5 295 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 INPP5EQ9NRR6 644 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 IGLV3-16A0A075B6K0 115 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 SHC1P29353 583 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 CTBSQ01459 385 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 TMEFF1Q8IYR6 380 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 SIMC1Q8NDZ2 872 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 OR52R1Q8NGF1 315 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 DZANK1Q9NVP4 752 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 NAALAD2Q9Y3Q0 740 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 TTC3P53804 2025 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 TRDV1A0A1B0GX56 115 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 PRSS38A1L453 326 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 LGI1O95970 557 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 HTR1FP30939 366 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 CDK10Q15131 360 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 TMEM52BQ4KMG9 183 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 FAM26EQ8N5C1 309 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 INO80EQ8NBZ0 244 aaPredicted RBP16■□□□□ 0.15
SMARCA4-215ENST00000590574 VN1R2Q8NFZ6 395 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 OR5AK2Q8NH90 309 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 CLDND1Q9NY35 253 aa16■□□□□ 0.15
SMARCA4-215ENST00000590574 SYT5O00445 386 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 RDH16O75452 317 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 FUT1P19526 365 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 ZFP36L2P47974 494 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 CD300CQ08708 224 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 COMMD7Q86VX2 200 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 SLC35B4Q969S0 331 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 KIAA1143Q96AT1 154 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 KCMF1Q9P0J7 381 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 PLXNB2O15031 1838 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 RGPD3A6NKT7 1758 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 RGPD4Q7Z3J3 1758 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 LRIT2A6NDA9 550 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 SOX1O00570 391 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 VAMP1P23763 118 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 KIR2DS3Q14952 304 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 KIAA1211LQ6NV74 962 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 SLC48A1Q6P1K1 146 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 ABHD17CQ6PCB6 329 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 APH1BQ8WW43 257 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 SLC52A3Q9NQ40 469 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 PARP14Q460N5 1801 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 METTL21EPA6NDL7 271 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 AHSA1O95433 338 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 CPEP16870 476 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms