RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 UCK2Q9BZX2 261 aa10.14□□□□□ -0.79
SMAD4-211ENST00000590499 ENKD1Q9H0I2 346 aa10.14□□□□□ -0.79
SMAD4-211ENST00000590499 SDHAF3Q9NRP4 125 aa10.14□□□□□ -0.79
SMAD4-211ENST00000590499 UBQLN4Q9NRR5 601 aa10.14□□□□□ -0.79
SMAD4-211ENST00000590499 MED11Q9P086 117 aa10.14□□□□□ -0.79
SMAD4-211ENST00000590499 CAMK2AQ9UQM7 478 aa10.14□□□□□ -0.79
SMAD4-211ENST00000590499 PDZD2O15018 2839 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 AKAP9Q99996 3911 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 CREBBPQ92793 2442 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 RNF103-CHMP3A0A140T963 221 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 A0A1W2PQD3 144 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 NKX2-6A6NCS4 301 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 MBD3L4A6NDZ8 208 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 MBD3L3A6NE82 208 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 MBD3L5A6NJ08 208 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 FAM90A27PA6NNH2 459 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 HMGB1P1B2RPK0 211 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 C9JVG2 144 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 FAM47E-STBD1D6RA91 191 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 SOX30O94993 753 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 GCKP35557 465 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 SOAT1P35610 550 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 ZFP36L2P47974 494 aaKnown RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 STARP49675 285 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 NME5P56597 212 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 RPS26P62854 115 aaKnown RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 C17orf67Q0P5P2 114 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 PDCD4Q53EL6 469 aaKnown RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 DCST2Q5T1A1 773 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 ANXA8L1Q5VT79 327 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 AAGABQ6PD74 315 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 BHLHB9Q6PI77 547 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 ENPP6Q6UWR7 440 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 C6orf120Q7Z4R8 191 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 CLEC4FQ8N1N0 589 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 TNIP2Q8NFZ5 429 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 OR5D16Q8NGK9 328 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 OR4A15Q8NGL6 344 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 OR10Q1Q8NGQ4 319 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 GOT1L1Q8NHS2 421 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 MBD3L2Q8NHZ7 208 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 MIPOL1Q8TD10 442 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 ADAMTS15Q8TE58 950 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 SFXN2Q96NB2 322 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 CCDC115Q96NT0 180 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 OR7D2Q96RA2 312 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 OR52B2Q96RD2 323 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 KLHDC3Q9BQ90 382 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 TUBA1CQ9BQE3 449 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 TRIM8Q9BZR9 551 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 CALHM2Q9HA72 323 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 SLCO1B3Q9NPD5 702 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 ARGLU1Q9NWB6 273 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 BTNL2Q9UIR0 455 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 FAF1Q9UNN5 650 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 RPH3AQ9Y2J0 694 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-211ENST00000590499 USH1CQ9Y6N9 552 aa10.13□□□□□ -0.79
SMAD4-211ENST00000590499 OR2M5A3KFT3 312 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 HSPB2A8KAH6 182 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 HCRTR2O43614 444 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 NDUFB5O43674 189 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 C1QCP02747 245 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 PGRP06401 933 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 IDO1P14902 403 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 HK1P19367 917 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 EPHA1P21709 976 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 TCEA1P23193 301 aaKnown RBP10.12□□□□□ -0.79
SMAD4-211ENST00000590499 S100A3P33764 101 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 DGKQP52824 942 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 CLDN15P56746 228 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 SF3B4Q15427 424 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMAD4-211ENST00000590499 CD226Q15762 336 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 HSPB2Q16082 182 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 BCL2A1Q16548 175 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 SLC25A35Q3KQZ1 300 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 GLYR1Q49A26 553 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-211ENST00000590499 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMAD4-211ENST00000590499 SAXO2Q658L1 398 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 ALKBH2Q6NS38 261 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 EPGNQ6UW88 154 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 ARSKQ6UWY0 536 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.12□□□□□ -0.79
SMAD4-211ENST00000590499 C9orf106Q8NAJ2 232 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 GATSQ8NAP1 163 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 RELL2Q8NC24 303 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-211ENST00000590499 CHDHQ8NE62 594 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-211ENST00000590499 VPS37AQ8NEZ2 397 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 NEURL3Q96EH8 262 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 SLC35G5Q96KT7 338 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 SDF2Q99470 211 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 PTGES2Q9H7Z7 377 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 HHATLQ9HCP6 504 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 KCNJ16Q9NPI9 418 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 SDR39U1Q9NRG7 319 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-211ENST00000590499 CLCF1Q9UBD9 225 aa10.12□□□□□ -0.79
SMAD4-211ENST00000590499 MYO9AB2RTY4 2548 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 SPG11Q96JI7 2443 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 NPIPA5A0A0B4J1W7 369 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 C7orf72A4D263 438 aa10.11□□□□□ -0.79
SMAD4-211ENST00000590499 NPIPA7E9PJI5 369 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms