RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 THOC1Q96FV9 657 aaKnown RBP16.43■□□□□ 0.22
DDX39A-212ENST00000590260 SPOCK3Q9BQ16 436 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 CCDC28BQ9BUN5 200 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 KCNJ16Q9NPI9 418 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 CARD8Q9Y2G2 431 aa16.43■□□□□ 0.22
DDX39A-212ENST00000590260 C7orf72A4D263 438 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 H3BML4 177 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 KIAA0513O60268 411 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 IL6P05231 212 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 PEPDP12955 493 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 POU3F2P20265 443 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-212ENST00000590260 GPR68Q15743 365 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 SYPL1Q16563 259 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 CTU2Q2VPK5 515 aaKnown RBP16.42■□□□□ 0.22
DDX39A-212ENST00000590260 ZNF621Q6ZSS3 439 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 MTERF4Q7Z6M4 381 aaKnown RBP16.42■□□□□ 0.22
DDX39A-212ENST00000590260 HMGN2P46Q86SG4 172 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 MISPQ8IVT2 679 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 MIER2Q8N344 545 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 GTPBP8Q8N3Z3 284 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-212ENST00000590260 ANKFN1Q8N957 763 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 RFWD2Q8NHY2 731 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 FIG4Q92562 907 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 GTF2H4Q92759 462 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 ROPN1LQ96C74 230 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 AURKBQ96GD4 344 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-212ENST00000590260 ZNF845Q96IR2 970 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-212ENST00000590260 ADGRG7Q96K78 797 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 ZBTB18Q99592 522 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 PIGQQ9BRB3 760 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 RUBCNLQ9H714 662 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 L3MBTL1Q9Y468 752 aa16.42■□□□□ 0.22
DDX39A-212ENST00000590260 A0A087WZY1 265 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 FAM234BA2RU67 622 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 SERINC4A6NH21 518 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 POLR3GO15318 223 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-212ENST00000590260 SEC14L5O43304 696 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 EDF1O60869 148 aaKnown RBP16.41■□□□□ 0.22
DDX39A-212ENST00000590260 STX11O75558 287 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 NTN1O95631 604 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 AK1P00568 194 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 CHRM4P08173 479 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 GUSBP08236 651 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 COX6B1P14854 86 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 HPGDP15428 266 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 ZNF17P17021 662 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 BMP5P22003 454 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 SHC1P29353 583 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 GCKP35557 465 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 CHI3L1P36222 383 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-212ENST00000590260 KHKP50053 298 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 SKP2Q13309 424 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 RCAN2Q14206 197 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 SLC2A7Q6PXP3 512 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 MEX3BQ6ZN04 569 aaKnown RBP16.41■□□□□ 0.22
DDX39A-212ENST00000590260 MED12LQ86YW9 2145 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 GPR119Q8TDV5 335 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 WNT2BQ93097 391 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 RNF145Q96MT1 663 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 PAIP1Q9H074 479 aaKnown RBP16.41■□□□□ 0.22
DDX39A-212ENST00000590260 QRSL1Q9H0R6 528 aaKnown RBP16.41■□□□□ 0.22
DDX39A-212ENST00000590260 SLC38A1Q9H2H9 487 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 ZNF385DQ9H6B1 395 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 JKAMPQ9P055 326 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 CACNA1DQ01668 2161 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 APCP25054 2843 aa16.41■□□□□ 0.22
DDX39A-212ENST00000590260 CLDN24A6NM45 220 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 RFXANKO14593 260 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 DNAJA2O60884 412 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 ADAM11O75078 769 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 RCBTB2O95199 551 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 IL2RAP01589 272 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 OPN1LWP04000 364 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 ZCCHC18P0CG32 403 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 CAPN3P20807 821 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 P2RX1P51575 399 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 CHRNEQ04844 493 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 FOXF1Q12946 379 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 SNTB1Q13884 538 aaKnown RBP16.4■□□□□ 0.22
DDX39A-212ENST00000590260 SLC25A35Q3KQZ1 300 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 BLOC1S3Q6QNY0 202 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 MSANTD1Q6ZTZ1 278 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 C16orf62Q7Z3J2 963 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 MSRB3Q8IXL7 192 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 DMRTC2Q8IXT2 367 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-212ENST00000590260 GCNT2Q8N0V5 402 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 METTL25Q8N6Q8 603 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 ZNF614Q8N883 585 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 ZNF527Q8NB42 609 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 FAM71CQ8NEG0 241 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 ZBTB8AQ96BR9 441 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 DTNBP1Q96EV8 351 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 EXD2Q9NVH0 621 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 SLAMF8Q9P0V8 285 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 ZNF629Q9UEG4 869 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-212ENST00000590260 AP4B1Q9Y6B7 739 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 HEATR5AQ86XA9 2040 aa16.4■□□□□ 0.22
DDX39A-212ENST00000590260 PDZD2O15018 2839 aa16.39■□□□□ 0.21
DDX39A-212ENST00000590260 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms