RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.81	□□□□□ -0.68
RFX2-215	ENST00000589742	L3MBTL1	Q9Y468	752 aa		10.81	□□□□□ -0.68
RFX2-215	ENST00000589742	GMEB1	Q9Y692	573 aa		10.81	□□□□□ -0.68
RFX2-215	ENST00000589742		A0A1B0GUH1	482 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	OR14I1	A6ND48	311 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	TMEM247	A6NEH6	219 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	AGAP5	A6NIR3	686 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	BBIP1	A8MTZ0	92 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	FXYD1	O00168	92 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	BCKDK	O14874	412 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	ZNF264	O43296	627 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	NUDT14	O95848	222 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	RNF224	P0DH78	156 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	ARAF	P10398	606 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	UBL4A	P11441	157 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	ESRRA	P11474	423 aa	Predicted RBP	10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	PGM1	P36871	562 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	P2RX1	P51575	399 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	CCR4	P51679	360 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	CRISP3	P54108	245 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	GFRA1	P56159	465 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	KCNJ10	P78508	379 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	CDK6	Q00534	326 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	SRY	Q05066	204 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	FGFBP1	Q14512	234 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	TOMM34	Q15785	309 aa	Predicted RBP	10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	ADRM1	Q16186	407 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	RABL3	Q5HYI8	236 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	COQ5	Q5HYK3	327 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	RAET1L	Q5VY80	246 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	VASN	Q6EMK4	673 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	EIF3M	Q7L2H7	374 aa	Known RBP	10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	IFNE	Q86WN2	208 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	PEX5L	Q8IYB4	626 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	RPRML	Q8N4K4	120 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	TMCO5A	Q8N6Q1	288 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	OR52P1P	Q8NH57	321 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	OR10A6	Q8NH74	314 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	RELT	Q969Z4	430 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	DTNBP1	Q96EV8	351 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	WDYHV1	Q96HA8	205 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	TREX2	Q9BQ50	279 aa	Predicted RBP	10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	LAT2	Q9GZY6	243 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	MED17	Q9NVC6	651 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	THUMPD1	Q9NXG2	353 aa	Known RBP	10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	CALML5	Q9NZT1	146 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	ICAM5	Q9UMF0	924 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	CORO2B	Q9UQ03	480 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	CAMK2A	Q9UQM7	478 aa		10.8	□□□□□ -0.68
RFX2-215	ENST00000589742	MYO18B	Q8IUG5	2567 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742		A0A0G2JPF8	293 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	OR2M5	A3KFT3	312 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	HNRNPCL2	B2RXH8	293 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	HNRNPCL3	B7ZW38	293 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	C5orf58	C9J3I9	102 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	EIF4E2	O60573	245 aa	Known RBP	10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	HNRNPCL1	O60812	293 aa	Known RBP	10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	SHOX2	O60902	331 aa	Predicted RBP	10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	PGM3	O95394	542 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	FAM107A	O95990	144 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	OPN1LW	P04000	364 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	HNRNPCL4	P0DMR1	293 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	IL7R	P16871	459 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	RYK	P34925	604 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	GCK	P35557	465 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	ADH7	P40394	386 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	CPA2	P48052	419 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	PLAUR	Q03405	335 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	SKP2	Q13309	424 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	SCARB2	Q14108	478 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	GANAB	Q14697	944 aa	Known RBP	10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	CYP51A1	Q16850	503 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	NHSL2	Q5HYW2	709 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	AAGAB	Q6PD74	315 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	LSR	Q86X29	649 aa	Predicted RBP	10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	PTOV1	Q86YD1	416 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	FAM26E	Q8N5C1	309 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	PCYOX1L	Q8NBM8	494 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	POC1B	Q8TC44	478 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	GPR119	Q8TDV5	335 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	WDR60	Q8WVS4	1066 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	CNOT9	Q92600	299 aa	Known RBP	10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	KAT8	Q9H7Z6	458 aa	Known RBP	10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	RLIM	Q9NVW2	624 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	GID8	Q9NWU2	228 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	SUCO	Q9UBS9	1254 aa	Known RBP	10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	USP22	Q9UPT9	525 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	MEMO1	Q9Y316	297 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	ZNF337	Q9Y3M9	751 aa		10.79	□□□□□ -0.68
RFX2-215	ENST00000589742	CLEC18A	A5D8T8	446 aa		10.78	□□□□□ -0.68
RFX2-215	ENST00000589742	KDM4E	B2RXH2	506 aa	Predicted RBP	10.78	□□□□□ -0.68
RFX2-215	ENST00000589742	FAM47E-STBD1	D6RA91	191 aa		10.78	□□□□□ -0.68
RFX2-215	ENST00000589742		H0YC42	278 aa		10.78	□□□□□ -0.68
RFX2-215	ENST00000589742		H3BML4	177 aa		10.78	□□□□□ -0.68
RFX2-215	ENST00000589742	ADAM11	O75078	769 aa		10.78	□□□□□ -0.68
RFX2-215	ENST00000589742	ACTL6A	O96019	429 aa		10.78	□□□□□ -0.68
RFX2-215	ENST00000589742	DBI	P07108	87 aa	Known RBP	10.78	□□□□□ -0.68
RFX2-215	ENST00000589742	LINGO3	P0C6S8	592 aa		10.78	□□□□□ -0.68
RFX2-215	ENST00000589742	RPS4Y1	P22090	263 aa	Known RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms