RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 MT-CO3P00414 261 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 NGFRP08138 427 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 JMJD7P0C870 316 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 SMIM18P0DKX4 95 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 GSTM3P21266 225 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 IL12BP29460 328 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 ETV5P41161 510 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 ISL1P61371 349 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 RNF4P78317 190 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 RPP38P78345 283 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 HOXC5Q00444 222 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 RAPSNQ13702 412 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 KLHL26Q53HC5 615 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 C1orf94Q6P1W5 598 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 KLHL17Q6TDP4 642 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 GDF7Q7Z4P5 450 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 FAM71CQ8NEG0 241 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 CNOT9Q92600 299 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 HDAC2Q92769 488 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 GTPBP3Q969Y2 492 aaKnown RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 EFHD2Q96C19 240 aaPredicted RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 LMF1Q96S06 567 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 TRIM2Q9C040 744 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 AKIRIN1Q9H9L7 192 aaPredicted RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 KRCC1Q9NPI7 259 aaPredicted RBP11.11□□□□□ -0.63
CCBE1-203ENST00000589116 PCDHGA3Q9Y5H0 932 aa11.11□□□□□ -0.63
CCBE1-203ENST00000589116 A0A087WUU8 490 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 IGHV3-20A0A0C4DH32 117 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 SCDO00767 359 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 PLD2O14939 933 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 TSPAN2O60636 221 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 STK17BO94768 372 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 UTS2O95399 124 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 DLGAP3O95886 979 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 CSTAP01040 98 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 IGHEP01854 428 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 GKN3PP0CG01 181 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 OSMP13725 252 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 PRG2P13727 222 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 HPGDP15428 266 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 TBXA2RP21731 343 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 HTR2AP28223 471 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 GGT2P36268 569 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 NR0B1P51843 470 aaKnown RBP11.1□□□□□ -0.63
CCBE1-203ENST00000589116 PNLIPRP2P54317 469 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 NRG3P56975 720 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 FOXL2P58012 376 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 SLC26A5P58743 744 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 ALDH6A1Q02252 535 aaKnown RBP11.1□□□□□ -0.63
CCBE1-203ENST00000589116 CD47Q08722 323 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 PLCXD2Q0VAA5 305 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 TARDBPQ13148 414 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCBE1-203ENST00000589116 TOP3AQ13472 1001 aaPredicted RBP11.1□□□□□ -0.63
CCBE1-203ENST00000589116 APOFQ13790 326 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 OR1Q1Q15612 314 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 SOWAHCQ53LP3 525 aaPredicted RBP11.1□□□□□ -0.63
CCBE1-203ENST00000589116 RBM48Q5RL73 367 aaKnown RBP11.1□□□□□ -0.63
CCBE1-203ENST00000589116 FNDC7Q5VTL7 733 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF730Q6ZMV8 503 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 RRM2BQ7LG56 351 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 LSMEM1Q8N8F7 131 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 GALNT6Q8NCL4 622 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 OR2Y1Q8NGV0 311 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 OR4C3Q8NH37 302 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 PIGXQ8TBF5 258 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 PRR14Q9BWN1 585 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 TMEM27Q9HBJ8 222 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 EXOSC3Q9NQT5 275 aaKnown RBP11.1□□□□□ -0.63
CCBE1-203ENST00000589116 PISDQ9UG56 409 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF223Q9UK11 482 aaPredicted RBP11.1□□□□□ -0.63
CCBE1-203ENST00000589116 BLOC1S6Q9UL45 172 aa11.1□□□□□ -0.63
CCBE1-203ENST00000589116 A0A1W2PQD3 144 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 ABCB7O75027 752 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 BCAS1O75363 584 aaPredicted RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 REM1O75628 298 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 THY1P04216 161 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 POU2F1P14859 743 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 ENDOUP21128 410 aaKnown RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 MMP11P24347 488 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 ABCD3P28288 659 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 EPHA2P29317 976 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 ACAA2P42765 397 aaKnown RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 CRISP1P54107 249 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 TUBA4AP68366 448 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 IL5RAQ01344 420 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 TRIP6Q15654 476 aaKnown RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 FAM199XQ6PEV8 388 aaPredicted RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 MBOAT2Q6ZWT7 520 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 ZER1Q7Z7L7 766 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 APLFQ8IW19 511 aaPredicted RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 RNF113BQ8IZP6 322 aaKnown RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 DEPDC4Q8N2C3 294 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 TSPAN14Q8NG11 270 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 OR5L2Q8NGL0 311 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 GNPDA2Q8TDQ7 276 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF566Q969W8 418 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 OMA1Q96E52 524 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 SCNM1Q9BWG6 230 aa11.09□□□□□ -0.63
CCBE1-203ENST00000589116 TUBA8Q9NY65 449 aaPredicted RBP11.09□□□□□ -0.63
CCBE1-203ENST00000589116 REV1Q9UBZ9 1251 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms