RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 KRT6CP48668 564 aa19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 BTKQ06187 659 aa19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 SPOCK1Q08629 439 aa19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 CR1LQ2VPA4 569 aa19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 POC1BQ8TC44 478 aa19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 ACTRT2Q8TDY3 377 aa19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 ZNF775Q96BV0 537 aaPredicted RBP19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 MIEF1Q9NQG6 463 aa19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 ATP23Q9Y6H3 246 aa19.23■□□□□ 0.67
CAPNS1-205ENST00000588780 MYO1GB0I1T2 1018 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 ALG1L2C9J202 215 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 MANBAO00462 879 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 SLITRK5O94991 958 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 OXSR1O95747 527 aaPredicted RBP19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 NUDT14O95848 222 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 IGKV1D-16P01601 117 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 HSD3B1P14060 373 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 PTAFRP25105 342 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 HSD3B2P26439 372 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 OR3A2P47893 321 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 SERPINB8P50452 374 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 MANFP55145 182 aaKnown RBP19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 RAE1P78406 368 aaKnown RBP19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 C2orf80Q0P641 193 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 SLC29A2Q14542 456 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 TMEM176BQ3YBM2 270 aaPredicted RBP19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 SPIN4Q56A73 249 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 P2RY8Q86VZ1 359 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 ZNF100Q8IYN0 542 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 SLC43A2Q8N370 569 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 OR4C3Q8NH37 302 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 OR52N5Q8NH56 324 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 LMF2Q9BU23 707 aaKnown RBP19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 PRR14Q9BWN1 585 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 SHCBP1LQ9BZQ2 653 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 KLHL9Q9P2J3 617 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 FKBP7Q9Y680 259 aa19.22■□□□□ 0.67
CAPNS1-205ENST00000588780 CIB4A0PJX0 185 aa19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 CCDC188H7C350 402 aa19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 M0R1B8 84 aa19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 ANXA4P09525 319 aaPredicted RBP19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 TIA1P31483 386 aaKnown RBP eCLIP19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 EIF1P41567 113 aaKnown RBP19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 FOXF1Q12946 379 aa19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 GLE1Q53GS7 698 aaKnown RBP19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 PLD6Q8N2A8 252 aaKnown RBP19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 OR2L13Q8N349 312 aa19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 B4GALNT2Q8NHY0 566 aa19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 TRMOQ9BU70 441 aa19.21■□□□□ 0.67
CAPNS1-205ENST00000588780 OR5H1A6NKK0 313 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 CCT8L1PA6NM43 557 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 SCDO00767 359 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 RAD51DO75771 328 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 DDCP20711 480 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 ENPP1P22413 925 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 IGHV1-2P23083 117 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 CD40P25942 277 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 HMOX2P30519 316 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 NR4A2P43354 598 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 VPS26BQ4G0F5 336 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 ZNF544Q6NX49 715 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 B3GLCTQ6Y288 498 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 SZRD1Q7Z422 152 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 UBE2J2Q8N2K1 259 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 FAM110BQ8TC76 370 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 ELP4Q96EB1 424 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 APIPQ96GX9 242 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 INPP5KQ9BT40 448 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 GLIPR2Q9H4G4 154 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 CXorf36Q9H7Y0 433 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 MYNNQ9NPC7 610 aa19.2■□□□□ 0.66
CAPNS1-205ENST00000588780 A0A1W2PR80 420 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 TTC36A6NLP5 189 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 ZNF195O14628 629 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 ULK1O75385 1050 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 RPS17P08708 135 aaKnown RBP19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 SLC7A1P30825 629 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 PAFAH1B1P43034 410 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 MAGEA4P43358 317 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 ZNF483Q8TF39 744 aaPredicted RBP19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 C1QTNF6Q9BXI9 259 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 ACPTQ9BZG2 426 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 OCEL1Q9H607 264 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 GRID1Q9ULK0 1009 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 DYSFO75923 2080 aa19.19■□□□□ 0.66
CAPNS1-205ENST00000588780 NDUFS8O00217 210 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 PSMG1O95456 288 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 ELK4P28324 431 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 PRIM2P49643 509 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 PRKAG1P54619 331 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 RASGEF1BQ0VAM2 473 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 PRSS53Q2L4Q9 553 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 ARL13AQ5H913 290 aaPredicted RBP19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 SPDYAQ5MJ70 313 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 CREG2Q8IUH2 290 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 MISPQ8IVT2 679 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 C3orf56Q8N813 242 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 FBXO27Q8NI29 283 aa19.18■□□□□ 0.66
CAPNS1-205ENST00000588780 FBXO30Q8TB52 745 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms