RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TCFL5Q9UL49 500 aa10.49□□□□□ -0.73
SMAD4-205ENST00000588745 SLC7A7Q9UM01 511 aa10.49□□□□□ -0.73
SMAD4-205ENST00000588745 EP300Q09472 2414 aaPredicted RBP10.49□□□□□ -0.73
SMAD4-205ENST00000588745 PCNX2A6NKB5 2137 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 A0A0B4J2E0 115 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 A0A1B0GX12 115 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 A0A1W2PQD3 144 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 OR6C70A6NIJ9 312 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 SOCS6O14544 535 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 ADAM11O75078 769 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 PPM1BO75688 479 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 ZFAND5O76080 213 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 LYPD3O95274 346 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 NADKO95544 446 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-205ENST00000588745 UBL4AP11441 157 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 POU2F1P14859 743 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 TCN2P20062 427 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 ACAA2P42765 397 aaKnown RBP10.48□□□□□ -0.73
SMAD4-205ENST00000588745 RPS6KA3P51812 740 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 EFR3AQ14156 821 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 CD226Q15762 336 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 EXT1Q16394 746 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 BTBD16Q32M84 506 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 NDUFAF6Q330K2 333 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 ZNF691Q5VV52 312 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 ISLR2Q6UXK2 745 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 THAP5Q7Z6K1 395 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 NKAIN4Q8IVV8 208 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 GATSQ8NAP1 163 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 SETD9Q8NE22 299 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 OR11G2Q8NGC1 345 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 PIGXQ8TBF5 258 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 PHOSPHO1Q8TCT1 267 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 IMMP1LQ96LU5 166 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 PRSS27Q9BQR3 290 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 UCK2Q9BZX2 261 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 LIN28AQ9H9Z2 209 aaKnown RBP10.48□□□□□ -0.73
SMAD4-205ENST00000588745 TMEM27Q9HBJ8 222 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 SCOCQ9UIL1 159 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 NDRG4Q9ULP0 352 aaKnown RBP10.48□□□□□ -0.73
SMAD4-205ENST00000588745 MYRFQ9Y2G1 1151 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 PCDHGA6Q9Y5G7 932 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 GMPPBQ9Y5P6 360 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 NPFFR2Q9Y5X5 522 aa10.48□□□□□ -0.73
SMAD4-205ENST00000588745 A0A1B0GWA3 101 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 TMEM200CA6NKL6 621 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 ALG1L2C9J202 215 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 H3BNH8 94 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 ZNF264O43296 627 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 CHP2O43745 196 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 TNFSF15O95150 251 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 NAGAP17050 411 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 EPHA2P29317 976 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 RYKP34925 604 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 IFNGR2P38484 337 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 NUP107P57740 925 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 RPS18P62269 152 aaKnown RBP10.47□□□□□ -0.73
SMAD4-205ENST00000588745 ESRRGP62508 458 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 RPS15P62841 145 aaKnown RBP10.47□□□□□ -0.73
SMAD4-205ENST00000588745 LSM11P83369 360 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMAD4-205ENST00000588745 TARDBPQ13148 414 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMAD4-205ENST00000588745 SKP2Q13309 424 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 DNASE1L3Q13609 305 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 RAPSNQ13702 412 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 BLMHQ13867 455 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 PLAG1Q6DJT9 500 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 DESI1Q6ICB0 168 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 C1orf94Q6P1W5 598 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 TMEM154Q6P9G4 183 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 KIRREL2Q6UWL6 708 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 APOOLQ6UXV4 268 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 CD300LDQ6UXZ3 194 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 ZNF730Q6ZMV8 503 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 C16orf47Q6ZP98 133 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-205ENST00000588745 MBOAT2Q6ZWT7 520 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 NDUFAF7Q7L592 441 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 PPP1R32Q7Z5V6 425 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 ZER1Q7Z7L7 766 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 TMPRSS12Q86WS5 348 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 APLFQ8IW19 511 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-205ENST00000588745 NLGN4XQ8N0W4 816 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 ZNF786Q8N393 782 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 LSMEM1Q8N8F7 131 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 POGLUT1Q8NBL1 392 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 NLGN4YQ8NFZ3 816 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-205ENST00000588745 M1APQ8TC57 530 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 GRHL3Q8TE85 626 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 THAP3Q8WTV1 239 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-205ENST00000588745 TMEM255BQ8WV15 326 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 ARSGQ96EG1 525 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 HRASLS5Q96KN8 279 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 APOL4Q9BPW4 351 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 DEFB126Q9BYW3 111 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 ING2Q9H160 280 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 POLR1BQ9H9Y6 1135 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 MMP25Q9NPA2 562 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 FARSAQ9Y285 508 aaKnown RBP10.47□□□□□ -0.73
SMAD4-205ENST00000588745 HSPE1-MOB4S4R3N1 261 aa10.47□□□□□ -0.73
SMAD4-205ENST00000588745 CUL9Q8IWT3 2517 aa10.46□□□□□ -0.73
SMAD4-205ENST00000588745 NSG1A0A0A6YYJ2 146 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms