RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 OLIG3Q7RTU3 272 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 UBQLNLQ8IYU4 475 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 PNPT1Q8TCS8 783 aaKnown RBP17.35■□□□□ 0.37
CIRBP-217ENST00000588230 ENKD1Q9H0I2 346 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 RUBCNLQ9H714 662 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 NPHS2Q9NP85 383 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 POLE3Q9NRF9 147 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 MED17Q9NVC6 651 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 STOML1Q9UBI4 398 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 CARD8Q9Y2G2 431 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 WDR45Q9Y484 360 aa17.35■□□□□ 0.37
CIRBP-217ENST00000588230 SERINC4A6NH21 518 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 CLCA1A8K7I4 914 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 SHISA8B8ZZ34 492 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 HMGN4O00479 90 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 TNFRSF21O75509 655 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 NUDT14O95848 222 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 GUSBP08236 651 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 ZCCHC18P0CG32 403 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 COX6B1P14854 86 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 EEFSECP57772 596 aaKnown RBP17.34■□□□□ 0.37
CIRBP-217ENST00000588230 IRX1P78414 480 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-217ENST00000588230 ZNF117Q03924 483 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 ZNF141Q15928 474 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 RFWD2Q8NHY2 731 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 STON2Q8WXE9 905 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 SMPDL3BQ92485 455 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 ZBTB8AQ96BR9 441 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 SIKE1Q9BRV8 207 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 MED4Q9NPJ6 270 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 NPDC1Q9NQX5 325 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-217ENST00000588230 SLC6A13Q9NSD5 602 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 CCDC167Q9P0B6 97 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 LIPT1Q9Y234 373 aa17.34■□□□□ 0.37
CIRBP-217ENST00000588230 HCFC1P51610 2035 aa17.33■□□□□ 0.37
CIRBP-217ENST00000588230 MBD3L4A6NDZ8 208 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-217ENST00000588230 MBD3L3A6NE82 208 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-217ENST00000588230 MBD3L5A6NJ08 208 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-217ENST00000588230 DVL2O14641 736 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 SEC14L5O43304 696 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 OIP5O43482 229 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 UBL4AP11441 157 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 ZNF17P17021 662 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 NCF2P19878 526 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-217ENST00000588230 ATP4BP51164 291 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 P2RX1P51575 399 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 SQLEQ14534 574 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 TMEM44Q2T9K0 475 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 PLPPR5Q32ZL2 321 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 SLC25A35Q3KQZ1 300 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 AGKQ53H12 422 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 COX20Q5RI15 118 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 TYW3Q6IPR3 259 aaKnown RBP17.33■□□□□ 0.36
CIRBP-217ENST00000588230 BLOC1S3Q6QNY0 202 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 CBLN3Q6UW01 205 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 LURAP1LQ8IV03 231 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 LIX1LQ8IVB5 337 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 FUNDC1Q8IVP5 155 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 ZNF619Q8N2I2 560 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 GTPBP8Q8N3Z3 284 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-217ENST00000588230 TMCO5AQ8N6Q1 288 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 NAXEQ8NCW5 288 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 MBD3L2Q8NHZ7 208 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-217ENST00000588230 ZFP90Q8TF47 636 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 WNT2BQ93097 391 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 TM9SF2Q99805 663 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 SPOCK3Q9BQ16 436 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 RABEP2Q9H5N1 569 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 TPT1P8Q9HAU6 139 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 TMEM45AQ9NWC5 275 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 KCNE5Q9UJ90 142 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 ICAM5Q9UMF0 924 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 TRIM33Q9UPN9 1127 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 AP4B1Q9Y6B7 739 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 DOCK7Q96N67 2140 aa17.33■□□□□ 0.36
CIRBP-217ENST00000588230 AKAP9Q99996 3911 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 A0A0G2JND7 137 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 C7orf72A4D263 438 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 NR5A2O00482 541 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 ZNF264O43296 627 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 KIAA0513O60268 411 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 EIF4E2O60573 245 aaKnown RBP17.32■□□□□ 0.36
CIRBP-217ENST00000588230 UGT2B17O75795 530 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 NR2F1P10589 423 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 MAGEA8P43361 318 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 SUMO3P55854 103 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-217ENST00000588230 FUT5Q11128 374 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 NDUFAF6Q330K2 333 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 GTDC1Q4AE62 458 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 SLC2A7Q6PXP3 512 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 ADGRE4PQ86SQ3 457 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 GRAMD2AQ8IUY3 354 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 ANKFN1Q8N957 763 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 C9orf106Q8NAJ2 232 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 GTF2H4Q92759 462 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 SPDL1Q96EA4 605 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 TRNT1Q96Q11 434 aaKnown RBP17.32■□□□□ 0.36
CIRBP-217ENST00000588230 UCN2Q96RP3 112 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 SAP130Q9H0E3 1048 aa17.32■□□□□ 0.36
CIRBP-217ENST00000588230 KIAA1549Q9HCM3 1950 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms