RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 FOLR1P15328 257 aa13.58□□□□□ -0.24
CCDC43-203ENST00000588210 CMPK1P30085 196 aa13.58□□□□□ -0.24
CCDC43-203ENST00000588210 NR4A2P43354 598 aa13.58□□□□□ -0.24
CCDC43-203ENST00000588210 GINS1Q14691 196 aa13.58□□□□□ -0.24
CCDC43-203ENST00000588210 ENTPD8Q5MY95 495 aa13.58□□□□□ -0.24
CCDC43-203ENST00000588210 TMEM64Q6YI46 380 aa13.58□□□□□ -0.24
CCDC43-203ENST00000588210 CLDN22Q8N7P3 220 aa13.58□□□□□ -0.24
CCDC43-203ENST00000588210 ZNF582Q96NG8 517 aaPredicted RBP13.58□□□□□ -0.24
CCDC43-203ENST00000588210 PRAP1Q96NZ9 151 aa13.58□□□□□ -0.24
CCDC43-203ENST00000588210 DPH7Q9BTV6 452 aa13.58□□□□□ -0.24
CCDC43-203ENST00000588210 ZCCHC3Q9NUD5 404 aaKnown RBP13.58□□□□□ -0.24
CCDC43-203ENST00000588210 MRPS18AQ9NVS2 196 aaKnown RBP13.58□□□□□ -0.24
CCDC43-203ENST00000588210 TXNL4BQ9NX01 149 aaKnown RBP13.58□□□□□ -0.24
CCDC43-203ENST00000588210 RBMX2Q9Y388 322 aaKnown RBP13.58□□□□□ -0.24
CCDC43-203ENST00000588210 C9orf172C9J069 976 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 OR1F1O43749 312 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 EPPINO95925 133 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 IL7P13232 177 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 GSTM3P21266 225 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 GPC1P35052 558 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 RFX2P48378 723 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 GIPRP48546 466 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 NKX2-5P52952 324 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-203ENST00000588210 GAS1P54826 345 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 IFITM2Q01629 132 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 PRDX1Q06830 199 aaKnown RBP13.57□□□□□ -0.24
CCDC43-203ENST00000588210 KCNAB1Q14722 419 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 NDUFA5Q16718 116 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 KLHL22Q53GT1 634 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 OR4C11Q6IEV9 310 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 AMER3Q8N944 861 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 OR6F1Q8NGZ6 308 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 SFXN5Q8TD22 340 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 XAGE5Q8WWM1 108 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 UCN3Q969E3 161 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 LRR1Q96L50 414 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 FGF20Q9NP95 211 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-203ENST00000588210 TRPC4Q9UBN4 977 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ZNF221Q9UK13 617 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 FBXW2Q9UKT8 454 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ADAMTS20P59510 1910 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 CDRT1O95170 752 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 KRT8P05787 483 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 FGF5P12034 268 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ETV1P50549 477 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ANXA11P50995 505 aaKnown RBP13.57□□□□□ -0.24
CCDC43-203ENST00000588210 SMSP52788 366 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 WNT4P56705 351 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 CSNK1G2P78368 415 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ABATP80404 500 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 FUT5Q11128 374 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 SF3B4Q15427 424 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC43-203ENST00000588210 GLYR1Q49A26 553 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ZMAT1Q5H9K5 638 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ZNF362Q5T0B9 420 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ARMC4Q5T2S8 1044 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 NDUFAF5Q5TEU4 345 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ZNF517Q6ZMY9 492 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-203ENST00000588210 SZRD1Q7Z422 152 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 PPP1R3BQ86XI6 285 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 FAM20CQ8IXL6 584 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 OR6T1Q8NGN1 323 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 SUN3Q8TAQ9 357 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 CREB3L4Q8TEY5 395 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 APMAPQ9HDC9 416 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 MRPS30Q9NP92 439 aaKnown RBP13.57□□□□□ -0.24
CCDC43-203ENST00000588210 ISYNA1Q9NPH2 558 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 SLC35C2Q9NQQ7 365 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 FGF21Q9NSA1 209 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 RARRES3Q9UL19 164 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 B3GALT1Q9Y5Z6 326 aa13.57□□□□□ -0.24
CCDC43-203ENST00000588210 SNRNP200O75643 2136 aaKnown RBP13.56□□□□□ -0.24
CCDC43-203ENST00000588210 TMEM129A0AVI4 362 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 CHRM4P08173 479 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 MYL12AP19105 171 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 CD82P27701 267 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 NTSP30990 170 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 SSR2P43308 183 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 MAN2A2P49641 1150 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 RAB40BQ12829 278 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 GNA13Q14344 377 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 ZIC1Q15915 447 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 BAK1Q16611 211 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 ACSM5Q6NUN0 579 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 FIGLAQ6QHK4 219 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 MRGPREQ86SM8 312 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 RAB43Q86YS6 212 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 OR8K5Q8NH50 307 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 ZNF501Q96CX3 271 aaPredicted RBP13.56□□□□□ -0.24
CCDC43-203ENST00000588210 FCRL4Q96PJ5 515 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 GPA33Q99795 319 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 MED18Q9BUE0 208 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 FAIM2Q9BWQ8 316 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 PINK1Q9BXM7 581 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 OR2B2Q9GZK3 357 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 AICDAQ9GZX7 198 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 MIXL1Q9H2W2 232 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 FAM60AQ9NP50 221 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 AKAP13Q12802 2813 aa13.56□□□□□ -0.24
CCDC43-203ENST00000588210 PRODHO43272 600 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms