RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 ZNF619Q8N2I2 560 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 ATP6V1C2Q8NEY4 427 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 B4GALNT2Q8NHY0 566 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 RAB3IL1Q8TBN0 382 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 PHOSPHO1Q8TCT1 267 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 IGFBPL1Q8WX77 278 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 OSTF1Q92882 214 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 CAVIN3Q969G5 261 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 ZBTB8AQ96BR9 441 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 ZNF764Q96H86 408 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 METTL2AQ96IZ6 378 aaKnown RBP13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 KLHL15Q96M94 604 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 C1orf50Q9BV19 199 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 UBQLN4Q9NRR5 601 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 ACSS1Q9NUB1 689 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 SLC17A7Q9P2U7 560 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 KCNE3Q9Y6H6 103 aa13.56□□□□□ -0.24
PRKCSH-204ENST00000587290 C7orf72A4D263 438 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 KIAA1324LA8MWY0 1029 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 SCAMP2O15127 329 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 TBX19O60806 448 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 LAMP1P11279 417 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 ALDH3A1P30838 453 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 ARRB2P32121 409 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 POU6F2P78424 691 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 PTGR1Q14914 329 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 ZNF239Q16600 458 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 ARL13AQ5H913 290 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 CPTPQ5TA50 214 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 CDC73Q6P1J9 531 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 ESPNLQ6ZVH7 1005 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 PLEKHM3Q6ZWE6 761 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 OLIG3Q7RTU3 272 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 TDRPQ86YL5 185 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 OR6Y1Q8NGX8 325 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 C3orf30Q96M34 536 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 BTBD2Q9BX70 525 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 CXorf36Q9H7Y0 433 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 CARD8Q9Y2G2 431 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 RTTNQ86VV8 2226 aa13.55□□□□□ -0.24
PRKCSH-204ENST00000587290 IGHV3-15A0A0B4J1V0 119 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 TLDC2A0PJX2 215 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 INAFM1C9JVW0 142 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 TRIM13O60858 407 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 PEX11AO75192 247 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 SPAG7O75391 227 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 CNOT4O95628 575 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 NUDT14O95848 222 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 TUBBP07437 444 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 ME2P23368 584 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 HPCAL1P37235 193 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 TP53BP2Q13625 1128 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 UGT3A2Q3SY77 523 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 LRIG3Q6UXM1 1119 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 KRTCAP2Q8N6L1 136 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 ZNF614Q8N883 585 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 OR5AK3PQ8NH89 298 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 FBXO27Q8NI29 283 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 ACTRT2Q8TDY3 377 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 NEUROG1Q92886 237 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 S100PBPQ96BU1 408 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 GSX2Q9BZM3 304 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 ANKZF1Q9H8Y5 726 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 STOML1Q9UBI4 398 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 TRAF6Q9Y4K3 522 aa13.54□□□□□ -0.24
PRKCSH-204ENST00000587290 KIF2AO00139 706 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 SKAP2O75563 359 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 SLU7O95391 586 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 C6orf47O95873 294 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 CHEK2O96017 543 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 ASMTP46597 345 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 SERPINB4P48594 390 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 CARD18P57730 90 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 RPS26P62854 115 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 DCST2Q5T1A1 773 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 PRSS57Q6UWY2 283 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 TFAP2EQ6VUC0 442 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 RNF165Q6ZSG1 346 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 BEND4Q6ZU67 534 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 TRABD2AQ86V40 505 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 TUSC5Q8IXB3 177 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 CLEC4FQ8N1N0 589 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 MAPK1IP1LQ8NDC0 245 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 OR5D16Q8NGK9 328 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 RFWD2Q8NHY2 731 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 RNF128Q8TEB7 428 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 TMEM171Q8WVE6 324 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 AKAP1Q92667 903 aaKnown RBP eCLIP13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 APOPT1Q96IL0 206 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 BDH2Q9BUT1 245 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 PIGUQ9H490 435 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 COQ10BQ9H8M1 238 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 ATP6V1HQ9UI12 483 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 TMED5Q9Y3A6 229 aa13.53□□□□□ -0.24
PRKCSH-204ENST00000587290 CENPVL1A0A0U1RR11 272 aa13.52□□□□□ -0.25
PRKCSH-204ENST00000587290 A0A1W2PNR3 127 aa13.52□□□□□ -0.25
PRKCSH-204ENST00000587290 A0A1W2PQD3 144 aa13.52□□□□□ -0.25
PRKCSH-204ENST00000587290 FAM171A2A8MVW0 826 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms