RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ZNF675Q8TD23 568 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 PROX1Q92786 737 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 TMBIM1Q969X1 311 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 C14orf79Q96F83 325 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 CNRIP1Q96F85 164 aaPredicted RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 HSH2DQ96JZ2 352 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 EPYCQ99645 322 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 MAPKAP1Q9BPZ7 522 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 SPOCK3Q9BQ16 436 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 ADI1Q9BV57 179 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 AICDAQ9GZX7 198 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 ENKD1Q9H0I2 346 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 GSX1Q9H4S2 264 aaPredicted RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 EVA1AQ9H8M9 152 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 ZFAND3Q9H8U3 227 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 PNPLA3Q9NST1 481 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 EXD2Q9NVH0 621 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 DDX18Q9NVP1 670 aaKnown RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 NTMQ9P121 344 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 LRFN1Q9P244 771 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 TNFRSF10DQ9UBN6 386 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 TEKT2Q9UIF3 430 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 CES1P1Q9UKY3 287 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 NAALAD2Q9Y3Q0 740 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 FAM32AQ9Y421 112 aaKnown RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 MAP1AP78559 2803 aaPredicted RBP7.19□□□□□ -1.26
VMP1-204ENST00000587259 GTF3C1Q12789 2109 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 ACANP16112 2415 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 A0A0G2JPF8 293 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 TTC36A6NLP5 189 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 HNRNPCL2B2RXH8 293 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 HNRNPCL3B7ZW38 293 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 C4orf51C9J302 202 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 SOCS2O14508 198 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 EI24O14681 340 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 HS6ST1O60243 411 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 B4GALT2O60909 372 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 IFNW1P05000 195 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 BCHEP06276 602 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 HNRNPCL4P0DMR1 293 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 THRBP10828 461 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 RNH1P13489 461 aaKnown RBP7.19□□□□□ -1.26
VMP1-204ENST00000587259 CPMP14384 443 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 PORP16435 677 aaPredicted RBP7.19□□□□□ -1.26
VMP1-204ENST00000587259 ZNF24P17028 368 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 EFNA1P20827 205 aaPredicted RBP7.19□□□□□ -1.26
VMP1-204ENST00000587259 MATN1P21941 496 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 IFNA8P32881 189 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 CAPGP40121 348 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 MEOX1P50221 254 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 CDK9P50750 372 aaKnown RBP7.19□□□□□ -1.26
VMP1-204ENST00000587259 SMIM11AP58511 58 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 BTG2P78543 158 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 MERTKQ12866 999 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 BLMHQ13867 455 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 NSDHLQ15738 373 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 KRTCAP3Q53RY4 240 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 COX20Q5RI15 118 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 C18orf63Q68DL7 685 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 SLC25A25Q6KCM7 469 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 C16orf47Q6ZP98 133 aaPredicted RBP7.19□□□□□ -1.26
VMP1-204ENST00000587259 EPHX4Q8IUS5 362 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 ZNF595Q8IYB9 648 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 GHDCQ8N2G8 530 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 C10orf111Q8N326 155 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 ACBD4Q8NC06 268 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 MAGEE2Q8TD90 523 aaPredicted RBP7.19□□□□□ -1.26
VMP1-204ENST00000587259 PMM1Q92871 262 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 ELP4Q96EB1 424 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 TPD52L3Q96J77 140 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 ZNF681Q96N22 645 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 ACTRT3Q9BYD9 372 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 LIN28AQ9H9Z2 209 aaKnown RBP7.19□□□□□ -1.26
VMP1-204ENST00000587259 BCL2L10Q9HD36 194 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 MMP25Q9NPA2 562 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 LANCL2Q9NS86 450 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 GPATCH2Q9NW75 528 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 GIN1Q9NXP7 522 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 KCMF1Q9P0J7 381 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 KIF17Q9P2E2 1029 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 ERVK-11Q9UQG0 969 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 RNF6Q9Y252 685 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 SLC9A8Q9Y2E8 581 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 AKAP6Q13023 2319 aa7.19□□□□□ -1.26
VMP1-204ENST00000587259 NIPBLQ6KC79 2804 aaeCLIP7.19□□□□□ -1.26
VMP1-204ENST00000587259 INTS1Q8N201 2190 aaKnown RBP7.18□□□□□ -1.26
VMP1-204ENST00000587259 A0A0G2JMM0 328 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 MYOCOSA0A1B0GUC4 107 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 A0A1W2PPB8 328 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 A0A1W2PRS3 328 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 PINLYPA6NC86 204 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 ARRDC5A6NEK1 342 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 WASHC1A8K0Z3 465 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 KIR3DP1A8MWS1 328 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 E9PLN8 166 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 G3V3Y1 287 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 HMGN4O00479 90 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 PRRG2O14669 202 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 ACOX3O15254 700 aa7.18□□□□□ -1.26
VMP1-204ENST00000587259 WIPF1O43516 503 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms