RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 FBXO30Q8TB52 745 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 FAM110BQ8TC76 370 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 CAVIN3Q969G5 261 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 STACQ99469 402 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 PRPF18Q99633 342 aaKnown RBP10□□□□□ -0.81
CCDC47-206ENST00000584112 TMEM109Q9BVC6 243 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 PINK1Q9BXM7 581 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 UBQLN4Q9NRR5 601 aa10□□□□□ -0.81
CCDC47-206ENST00000584112 ZCCHC3Q9NUD5 404 aaKnown RBP10□□□□□ -0.81
CCDC47-206ENST00000584112 PAQR5Q9NXK6 330 aaPredicted RBP10□□□□□ -0.81
CCDC47-206ENST00000584112 PRR14LQ5THK1 2151 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 RAI1Q7Z5J4 1906 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 A0A1W2PQD3 144 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 SH3D21A4FU49 640 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 CASKO14936 926 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 SLU7O95391 586 aaKnown RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 BPGMP07738 259 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 CPOXP36551 454 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 ZNF41P51814 821 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 SUCLG1P53597 346 aaKnown RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 POU6F2P78424 691 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 MAD2L1Q13257 205 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 PTGR1Q14914 329 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 SGCBQ16585 318 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 DUSP5Q16690 384 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 TMEM44Q2T9K0 475 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 C6orf136Q5SQH8 315 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 CPTPQ5TA50 214 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 FIGNL1Q6PIW4 674 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 APOOLQ6UXV4 268 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 MEX3DQ86XN8 651 aaKnown RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 NUDCD3Q8IVD9 361 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 WDR75Q8IWA0 830 aaKnown RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 METTL25Q8N6Q8 603 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 FNDC5Q8NAU1 212 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 OR56A1Q8NGH5 318 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 OR5M1Q8NGP8 315 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 ACTRT2Q8TDY3 377 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 OR5P2Q8WZ92 322 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 SMPDL3BQ92485 455 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 FIG4Q92562 907 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 ZBTB8AQ96BR9 441 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 MOAP1Q96BY2 351 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 FAM120BQ96EK7 910 aaKnown RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 CHMP6Q96FZ7 201 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 ZIM3Q96PE6 472 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 C1orf50Q9BV19 199 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 BTBD2Q9BX70 525 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 RNF122Q9H9V4 155 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 DUSP22Q9NRW4 184 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 SIRT3Q9NTG7 399 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 GIN1Q9NXP7 522 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 ZDHHC2Q9UIJ5 367 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 EIF3LQ9Y262 564 aaKnown RBP9.99□□□□□ -0.81
CCDC47-206ENST00000584112 VDAC3Q9Y277 283 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 SNX8Q9Y5X2 465 aa9.99□□□□□ -0.81
CCDC47-206ENST00000584112 UQCRHLA0A096LP55 91 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 C7orf72A4D263 438 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 TYROBPO43914 113 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 GMFGO60234 142 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 SKAP2O75563 359 aaPredicted RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 SNUPNO95149 360 aaKnown RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 HMGN2P05204 90 aaKnown RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 LAMP1P11279 417 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 EFNA1P20827 205 aaPredicted RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 PRPS1L1P21108 318 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 ATP6V1C1P21283 382 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 ME2P23368 584 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 CCT3P49368 545 aaKnown RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 CLDN15P56746 228 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 CLDN20P56880 219 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 LASP1Q14847 261 aaKnown RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 PON3Q15166 354 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 KRT71Q3SY84 523 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 EXOSC6Q5RKV6 272 aaKnown RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 IL23RQ5VWK5 629 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 CDC73Q6P1J9 531 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 VWA1Q6PCB0 445 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 MTERF4Q7Z6M4 381 aaKnown RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 GALNT10Q86SR1 603 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 GTPBP8Q8N3Z3 284 aaPredicted RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 MREGQ8N565 214 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 ZNF527Q8NB42 609 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 OR7A2PQ8NGA2 310 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 OR4C3Q8NH37 302 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 PSMA8Q8TAA3 256 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 FNDC9Q8TBE3 224 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 SFXN5Q8TD22 340 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 PIGTQ969N2 578 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 TUBGCP3Q96CW5 907 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 STARD4Q96DR4 205 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 PGM2Q96G03 612 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 C16orf58Q96GQ5 468 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 ZNF845Q96IR2 970 aaPredicted RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 C3orf30Q96M34 536 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 SLC39A3Q9BRY0 314 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 ACTRT3Q9BYD9 372 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 PRRG4Q9BZD6 226 aa9.98□□□□□ -0.81
CCDC47-206ENST00000584112 BHLHE41Q9C0J9 482 aaPredicted RBP9.98□□□□□ -0.81
CCDC47-206ENST00000584112 HOXD1Q9GZZ0 328 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms