RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 UBL4AP11441 157 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 CRATP43155 626 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 CCR4P51679 360 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 CLDN18P56856 261 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 IRX1P78414 480 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 TXNL4AP83876 142 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 GUCY1A3Q02108 690 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 FUT5Q11128 374 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 HSPB2Q16082 182 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 BCL2A1Q16548 175 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 GLYR1Q49A26 553 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 TYW3Q6IPR3 259 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 BLOC1S3Q6QNY0 202 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 CBLN3Q6UW01 205 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 FUNDC1Q8IVP5 155 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF619Q8N2I2 560 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 TNIP2Q8NFZ5 429 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 LILRB4Q8NHJ6 448 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 STON2Q8WXE9 905 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 GTF2H4Q92759 462 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 AURKBQ96GD4 344 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 KLHDC3Q9BQ90 382 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 RABEP2Q9H5N1 569 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 TPT1P8Q9HAU6 139 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 KCNJ16Q9NPI9 418 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 POLE3Q9NRF9 147 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 FGFR1OP2Q9NVK5 253 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 LIPT1Q9Y234 373 aa11.39□□□□□ -0.59
SMARCE1-218ENST00000582955 PCNX3Q9H6A9 2034 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 ARHGAP21Q5T5U3 1957 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 PRAMEF27A3QJZ7 478 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 C19orf84I3L1E1 186 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF264O43296 627 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 ATP8B1O43520 1251 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 TOXO94900 526 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 H6PDO95479 791 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 CSTAP01040 98 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 SNRPB2P08579 225 aaKnown RBP11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 NR2F1P10589 423 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 ETFAP13804 333 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF17P17021 662 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 CAPN3P20807 821 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 TIMP3P35625 211 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 P2RX1P51575 399 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 SUMO3P55854 103 aaPredicted RBP11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 EEFSECP57772 596 aaKnown RBP11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 CHRNEQ04844 493 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 SF3A3Q12874 501 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 ZNF141Q15928 474 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 SYPL1Q16563 259 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 PLPPR5Q32ZL2 321 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 PLXDC2Q6UX71 529 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 FRRS1Q6ZNA5 592 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 P4HA3Q7Z4N8 544 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 HMGN2P46Q86SG4 172 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 GRAMD2AQ8IUY3 354 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 LIX1LQ8IVB5 337 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 ANKFN1Q8N957 763 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 TOR1AIP2Q8NFQ8 470 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 ZBTB8AQ96BR9 441 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 RNF145Q96MT1 663 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 TMEM120AQ9BXJ8 343 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 PAIP1Q9H074 479 aaKnown RBP11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 CALHM2Q9HA72 323 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 STOML1Q9UBI4 398 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 KCNE5Q9UJ90 142 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 AP4B1Q9Y6B7 739 aa11.38□□□□□ -0.59
SMARCE1-218ENST00000582955 CACNA1CQ13936 2221 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 A0A096LPI6 279 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 MBD3L4A6NDZ8 208 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 MBD3L3A6NE82 208 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 MBD3L5A6NJ08 208 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 CYSRT1A8MQ03 144 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 H0YC42 278 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 CLIC1O00299 241 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 DVL2O14641 736 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 EIF4E2O60573 245 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 CHRM4P08173 479 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 GUSBP08236 651 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 UBTFL6P0CB48 400 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 COX6B1P14854 86 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 BMP5P22003 454 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 ME2P23368 584 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 CEACAM8P31997 349 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 MAGEA8P43361 318 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 SUCLG1P53597 346 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 TPD52P55327 224 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 CLDN20P56880 219 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 DSTNP60981 165 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 FOXF1Q12946 379 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 MAPK14Q16539 360 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 TMEM44Q2T9K0 475 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 EIF3MQ7L2H7 374 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 GTPBP8Q8N3Z3 284 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 C9orf106Q8NAJ2 232 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 NAXEQ8NCW5 288 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 MBD3L2Q8NHZ7 208 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 TRNT1Q96Q11 434 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 NPAS1Q99742 590 aa11.37□□□□□ -0.59
SMARCE1-218ENST00000582955 TM9SF2Q99805 663 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms