RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 IL12BP29460 328 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 MVDP53602 400 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 RAD23AP54725 363 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 SELENOWP63302 87 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 DAG1Q14118 895 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 EFR3AQ14156 821 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 ADRM1Q16186 407 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 INAQ16352 499 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 NTRK2Q16620 822 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 NRF1Q16656 503 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 DECR1Q16698 335 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 ZNF791Q3KP31 576 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 CT45A2Q5DJT8 189 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 OR2T5Q6IEZ7 315 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 CDC73Q6P1J9 531 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 IL20RBQ6UXL0 311 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 NPSR1Q6W5P4 371 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 MAMDC2Q7Z304 686 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 CYP4Z1Q86W10 505 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 COX18Q8N8Q8 333 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 OR2T29Q8NH02 315 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 PRR7Q8TB68 274 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 MIPOL1Q8TD10 442 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 GPR151Q8TDV0 419 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 ADAMTS15Q8TE58 950 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 SLC9A6Q92581 669 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 PROX1Q92786 737 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 TMBIM1Q969X1 311 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 OMA1Q96E52 524 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 GIMAP5Q96F15 307 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 TPD52L3Q96J77 140 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 SECISBP2Q96T21 854 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 STACQ99469 402 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 BTBD2Q9BX70 525 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 RUBCNLQ9H714 662 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 DUSP22Q9NRW4 184 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 GPATCH2Q9NW75 528 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 ENOPH1Q9UHY7 261 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 KLF13Q9Y2Y9 288 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 FAM32AQ9Y421 112 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 OR6C70A6NIJ9 312 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 HS6ST1O60243 411 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 NEURL1O76050 574 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 TNFAIP8O95379 198 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 NR2F1P10589 423 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 FPR1P21462 350 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 MATN1P21941 496 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 DNAJA1P31689 397 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 GABRA3P34903 492 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 MAP3K8P41279 467 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 RPS6KA3P51812 740 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 PSG6Q00889 435 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 PDK3Q15120 406 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 ZNF766Q5HY98 468 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 COX20Q5RI15 118 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 ZNF468Q5VIY5 522 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 C1QL3Q5VWW1 255 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 SLC25A25Q6KCM7 469 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 TNFAIP8L2Q6P589 184 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 LYPD8Q6UX82 237 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 NUP54Q7Z3B4 507 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 DHRSXQ8N5I4 330 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 FAM98AQ8NCA5 519 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 ZNF555Q8NEP9 628 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 SPPL2AQ8TCT8 520 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 NR4A3Q92570 626 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 COL21A1Q96P44 957 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 SIGLEC12Q96PQ1 595 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 PIGUQ9H490 435 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 USE1Q9NZ43 259 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 CNIH4Q9P003 139 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 KIF17Q9P2E2 1029 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 SLC13A4Q9UKG4 626 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 CBLCQ9ULV8 474 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 SHANK1Q9Y566 2161 aa12.37□□□□□ -0.43
CSNK1D-220ENST00000581737 CACNA1DQ01668 2161 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 H0YAE9 185 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 EI24O14681 340 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 NME2P1O60361 137 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 ZNF354AO60765 605 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 NME6O75414 186 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 REM1O75628 298 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 AK1P00568 194 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 P04436 131 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 IFNW1P05000 195 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 BCHEP06276 602 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 SP1P08047 785 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 ACP2P11117 423 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 PRF1P14222 555 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 NME2P22392 152 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 LCN1P31025 176 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 IFNA8P32881 189 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 PIGAP37287 484 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 GTF2A1P52655 376 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 CHN2P52757 468 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 PNLIPRP2P54317 469 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 PCBP3P57721 371 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 SMIM11AP58511 58 aa12.36□□□□□ -0.43
CSNK1D-220ENST00000581737 POU6F2P78424 691 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms