RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 JAZF1Q86VZ6 243 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 ZC3HC1Q86WB0 502 aaKnown RBP6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 C1QL4Q86Z23 238 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 TXLNBQ8N3L3 684 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 WDR31Q8NA23 367 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 WDR20Q8TBZ3 569 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF675Q8TD23 568 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 SLC9A6Q92581 669 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF75CPQ92670 426 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 CPNE4Q96A23 557 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 ZBTB8AQ96BR9 441 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 KLHL29Q96CT2 875 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 KLHL15Q96M94 604 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 LRRC37BQ96QE4 947 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF300Q96RE9 604 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 MCMBPQ9BTE3 642 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 SUCNR1Q9BXA5 334 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 SLITRK2Q9H156 845 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 TSPY26PQ9H489 355 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 COQ10BQ9H8M1 238 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 LPAR2Q9HBW0 351 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 ACSS1Q9NUB1 689 aaPredicted RBP6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 CD274Q9NZQ7 290 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 NTMQ9P121 344 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 STOML1Q9UBI4 398 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 EGFL7Q9UHF1 273 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 ZKSCAN5Q9Y2L8 839 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 PPIAL4AQ9Y536 164 aa6.68□□□□□ -1.34
SMARCE1-217ENST00000580654 A0A087WZY1 265 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 A0A1W2PRB8 838 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 C1orf226A1L170 272 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 LYNX1G3V0Z9 82 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 K7EPI3 171 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 RGS14O43566 566 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 NDUFB5O43674 189 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 SEMA3DO95025 777 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 SNUPNO95149 360 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 TTC4O95801 387 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 MSMBP08118 114 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 NUDT17P0C025 328 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 LYNX1P0DP58 116 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 PIK3CGP48736 1102 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 IDH3GP51553 393 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 PSPHP78330 225 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 MRPS22P82650 360 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 PRR5P85299 388 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 POU4F1Q01851 419 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 SRSF4Q08170 494 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 C17orf67Q0P5P2 114 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 MLC1Q15049 377 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 GABRA6Q16445 453 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 PDSS1Q5T2R2 415 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 UGT2A3Q6UWM9 527 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 SLC46A3Q7Z3Q1 461 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 TRABD2AQ86V40 505 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 CARM1Q86X55 608 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 LILRA2Q8N149 483 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 ZCCHC24Q8N2G6 241 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF786Q8N393 782 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 OR7G2Q8NG99 324 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 OR9A2Q8NGT5 310 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 CLDND2Q8NHS1 167 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 UBTD2Q8WUN7 234 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 EXT2Q93063 718 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 TM4SF18Q96CE8 201 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 C1orf147Q96MC9 270 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 MRPL1Q9BYD6 325 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 FKRPQ9H9S5 495 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 PPANQ9NQ55 473 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 G6PC2Q9NQR9 355 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 MED17Q9NVC6 651 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 PDP1Q9P0J1 537 aaPredicted RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 DMGDHQ9UI17 866 aaKnown RBP6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 DCTN4Q9UJW0 460 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 MOKQ9UQ07 419 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 GRIP1Q9Y3R0 1128 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 OR10H1Q9Y4A9 318 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 PCDHGA11Q9Y5H2 935 aa6.67□□□□□ -1.34
SMARCE1-217ENST00000580654 FOXE1O00358 373 aaPredicted RBP6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 WNT9BO14905 357 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 BCAS2O75934 225 aaPredicted RBP6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 IL33O95760 270 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 IGKV1D-16P01601 117 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 IGHV3-9P01782 118 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 FGGP02679 453 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 SERPINF1P36955 418 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 PPOXP50336 477 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 ADIPOQQ15848 244 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 CPSF6Q16630 551 aaKnown RBP eCLIP6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 GRAMD1BQ3KR37 738 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 SH2D4BQ5SQS7 431 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 CCNYL2Q5T2Q4 361 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 LIPJQ5W064 366 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 FAHD2BQ6P2I3 314 aaPredicted RBP6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 C1QL2Q7Z5L3 287 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 MYLK4Q86YV6 388 aaPredicted RBP6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 LRRC58Q96CX6 371 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 FAHD2AQ96GK7 314 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 REXO5Q96IC2 774 aaKnown RBP6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 MUS81Q96NY9 551 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms