RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 HPS6Q86YV9 775 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 VSTM4Q8IW00 320 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 CDH26Q8IXH8 852 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 PRR22Q8IZ63 422 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 ZNF525Q8N782 197 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 Q8N9G6 341 aaPredicted RBP1.93□□□□□ -2.1
COPS3-213ENST00000577210 ZSCAN4Q8NAM6 433 aaPredicted RBP1.93□□□□□ -2.1
COPS3-213ENST00000577210 BHLHE23Q8NDY6 225 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 OR56B2PQ8NGI1 322 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 OR13C2Q8NGS9 318 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 TYMSOSQ8TAI1 123 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 ANKRD49Q8WVL7 239 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 SPRYD4Q8WW59 207 aaPredicted RBP1.93□□□□□ -2.1
COPS3-213ENST00000577210 ADIPOR1Q96A54 375 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 UPRTQ96BW1 309 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 DNAJA3Q96EY1 480 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 B3GALT6Q96L58 329 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 HCAR1Q9BXC0 346 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 MAGT1Q9H0U3 335 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 GLT8D2Q9H1C3 349 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 VPS37BQ9H9H4 285 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 GPN2Q9H9Y4 310 aaPredicted RBP1.93□□□□□ -2.1
COPS3-213ENST00000577210 TM9SF3Q9HD45 589 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 RAB18Q9NP72 206 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 POLE4Q9NR33 117 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 PRR34Q9NV39 138 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 ADAM22Q9P0K1 906 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 ARMCX1Q9P291 453 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 RCOR3Q9P2K3 495 aaPredicted RBP1.93□□□□□ -2.1
COPS3-213ENST00000577210 VSIG4Q9Y279 399 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 GMPPBQ9Y5P6 360 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 CCDC7Q96M83 1385 aa1.93□□□□□ -2.1
COPS3-213ENST00000577210 XKRY2A2RUG3 117 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 HELTA6NFD8 242 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 FAM47DPA6NHR8 397 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 SRRM5B3KS81 715 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 B4DXG7 233 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 FOXE1O00358 373 aaPredicted RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 CLDN5O00501 218 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 FCN1O00602 326 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CXCL11O14625 94 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 TNFSF11O14788 317 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 PHOX2AO14813 284 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ARPC3O15145 178 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 TM9SF1O15321 606 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ZSCAN12O43309 604 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 PPIHO43447 177 aaKnown RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 TSC22D2O75157 780 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ZNF253O75346 499 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ERLIN1O75477 346 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CABYRO75952 493 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 B3GAT3O94766 335 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 DUSP14O95147 198 aaKnown RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 SERPINA3P01011 423 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CHRNA1P02708 482 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 LAMP1P11279 417 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CPN1P15169 458 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ZNF44P15621 663 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 RPS2P15880 293 aaKnown RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 NT5EP21589 574 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CALB2P22676 271 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 GDF1P27539 372 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 NF2P35240 595 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 BDKRB1P46663 353 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 GNPDA1P46926 289 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ALDH3B2P48448 385 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 POU3F4P49335 361 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ACADVLP49748 655 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 SLC26A2P50443 739 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 EFNA3P52797 238 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ACTR3P61158 418 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 NTHL1P78549 312 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 EWSR1Q01844 656 aaKnown RBP eCLIP1.92□□□□□ -2.1
COPS3-213ENST00000577210 OC90Q02509 493 aaPredicted RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 PAX2Q02962 417 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CSTF1Q05048 431 aaKnown RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 ZNF33BQ06732 778 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 FGL1Q08830 312 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 MRPL28Q13084 256 aaKnown RBP1.92□□□□□ -2.1
COPS3-213ENST00000577210 KIAA0040Q15053 153 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 TEX44Q53QW1 395 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 FHL5Q5TD97 284 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 TTC23Q5W5X9 447 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 SLC22A10Q63ZE4 541 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 PAMR1Q6UXH9 720 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 TFAP2EQ6VUC0 442 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ZYG11AQ6WRX3 759 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ADAMTSL5Q6ZMM2 481 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 TAS2R42Q7RTR8 314 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 SH2D6Q7Z4S9 175 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 MCOLN2Q8IZK6 566 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 CLEC4FQ8N1N0 589 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 ANKFN1Q8N957 763 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 KLHL30-AS1Q8NEE0 82 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 AKR7LQ8NHP1 331 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 RAET1EQ8TD07 263 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 RLN3Q8WXF3 142 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 MYLPFQ96A32 169 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 FAF2Q96CS3 445 aa1.92□□□□□ -2.1
COPS3-213ENST00000577210 FAM122AQ96E09 287 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms