RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TMEM143Q96AN5 459 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 ZBTB8AQ96BR9 441 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 UPRTQ96BW1 309 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 BIRC7Q96CA5 298 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 ZFP3Q96NJ6 502 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 UHRF2Q96PU4 802 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 OR5B2Q96R09 309 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 LHPPQ9H008 270 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 RACGAP1Q9H0H5 632 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 SYT4Q9H2B2 425 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 C19orf12Q9NSK7 152 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 PLCXD1Q9NUJ7 323 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 TAS2R9Q9NYW1 312 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 TUBGCP4Q9UGJ1 667 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 ZNHIT2Q9UHR6 403 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 NXT1Q9UKK6 140 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 CLEC4EQ9ULY5 219 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 FZR1Q9UM11 496 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 OAZ3Q9UMX2 235 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 SLC22A13Q9Y226 551 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 RAP2CQ9Y3L5 183 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 TBL2Q9Y4P3 447 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 HS3ST3A1Q9Y663 406 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 CDH10Q9Y6N8 788 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 SCRIBQ14160 1630 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 USP47Q96K76 1375 aa4.53□□□□□ -1.69
TOPBP1-210ENST00000572787 MED19A0JLT2 244 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 LRP5LA4QPB2 252 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 MROH6A6NGR9 719 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 SAGE2PA6NJ88 616 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 F8VP50 259 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 BLOC1S5-TXNDC5H3BN57 136 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 PRKAB2O43741 272 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 CHST1O43916 411 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 PCDH7O60245 1069 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 GPR137BO60478 399 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 B3GAT3O94766 335 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 LRATO95237 230 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 TMEM50AO95807 157 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 MT-CO3P00414 261 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 GAPDHP04406 335 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 PRKCGP05129 697 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 SNRPAP09012 282 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 NPSP0C0P6 89 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 H2BFMP0C1H6 154 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 PET100P0DJ07 73 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF43P17038 809 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 PGCP20142 388 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 BCKDHBP21953 392 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 FPR3P25089 353 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 MNDAP41218 407 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 CAPZBP47756 277 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 RGRP47804 291 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 ALDH3B2P48448 385 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 RPL14P50914 215 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 RAP1GDS1P52306 607 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 TAS2R38P59533 333 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 CDKL1Q00532 357 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 CEACAM7Q14002 265 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 OR4D1Q15615 310 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC15A2Q16348 729 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 TNXAQ16473 311 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 KLHL38Q2WGJ6 581 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 HLA-BQ31612 363 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 ACCSLQ4AC99 568 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC22A6Q4U2R8 563 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 YIF1BQ5BJH7 314 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 ALG10Q5BKT4 473 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 RNASE12Q5GAN4 147 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 ALG10BQ5I7T1 473 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 SAMD4BQ5PRF9 694 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 UTF1Q5T230 341 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 BEND3Q5T5X7 828 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 KCTD18Q6PI47 426 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 RHBDF2Q6PJF5 856 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 MOB2Q70IA6 237 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 Q7L0L9 218 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 TIPARPQ7Z3E1 657 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 NET1Q7Z628 596 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 ANKRD37Q7Z713 158 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF761Q86XN6 746 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF677Q86XU0 584 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 C1QL4Q86Z23 238 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 MB21D2Q8IYB1 491 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 SPAG16Q8N0X2 631 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC44A3Q8N4M1 653 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 NPEPL1Q8NDH3 523 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 B3GNT7Q8NFL0 401 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 DMBX1Q8NFW5 382 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 OR2AP1Q8NGE2 309 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 OR8K1Q8NGG5 319 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 OR6N2Q8NGY6 317 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 OR52E5Q8NH55 327 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC38A5Q8WUX1 472 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 DYDC1Q8WWB3 177 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 PYDC1Q8WXC3 89 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF333Q96JL9 665 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 RNF145Q96MT1 663 aa4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 XPO6Q96QU8 1125 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-210ENST00000572787 FMO2Q99518 471 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms