RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PSMA4P25789 261 aaKnown RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 SHC1P29353 583 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 LCN1P31025 176 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 PGM1P36871 562 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 ADH7P40394 386 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 LHX2P50458 406 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 SUCLG1P53597 346 aaKnown RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 DSCR4P56555 118 aaPredicted RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 CLDN18P56856 261 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 IRX1P78414 480 aaPredicted RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 C17orf67Q0P5P2 114 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 FOXF1Q12946 379 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 SKP2Q13309 424 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 NFYCQ13952 458 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 FGFBP1Q14512 234 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 PLPPR5Q32ZL2 321 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 RABL3Q5HYI8 236 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 NHSL2Q5HYW2 709 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 ZNF585AQ6P3V2 769 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 LRRC74BQ6ZQY2 392 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 MTDHQ86UE4 582 aaKnown RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 VRK2Q86Y07 508 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 PTOV1Q86YD1 416 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 FAM71CQ8NEG0 241 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 OR14L1PQ8NHC6 308 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 B4GALNT2Q8NHY0 566 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 NFKBIDQ8NI38 313 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 ITLN2Q8WWU7 325 aaPredicted RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 CNOT9Q92600 299 aaKnown RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 ABTB1Q969K4 478 aaPredicted RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 ANKRD27Q96NW4 1050 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 TRNT1Q96Q11 434 aaKnown RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 CGREF1Q99674 301 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 WFDC6Q9BQY6 131 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 EXO5Q9H790 373 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 MED17Q9NVC6 651 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 EXD2Q9NVH0 621 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 RLIMQ9NVW2 624 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 B4GALT7Q9UBV7 327 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.32□□□□□ -1.4
SMG6-209ENST00000571442 DKKL1Q9UK85 242 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 MEMO1Q9Y316 297 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 ZNF337Q9Y3M9 751 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 DTNAQ9Y4J8 743 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 CAPN7Q9Y6W3 813 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 MED12LQ86YW9 2145 aa6.32□□□□□ -1.4
SMG6-209ENST00000571442 ITPR2Q14571 2701 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 A1L4Q6 167 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 OR14I1A6ND48 311 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 AGAP5A6NIR3 686 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 AP3D1O14617 1153 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 PRRG2O14669 202 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 MRASO14807 208 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 ANGPT2O15123 496 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 HCRTR2O43614 444 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 DNAJA2O60884 412 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 CLDN1O95832 211 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 GUSBP08236 651 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 UBTFL6P0CB48 400 aaPredicted RBP6.31□□□□□ -1.4
SMG6-209ENST00000571442 NR2F1P10589 423 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 ZNF708P17019 499 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 CRYBA2P53672 197 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 CLDN20P56880 219 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 NUP107P57740 925 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 EEF1A1P68104 462 aaKnown RBP6.31□□□□□ -1.4
SMG6-209ENST00000571442 KCNJ10P78508 379 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 SRYQ05066 204 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 RBPJQ06330 500 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 GLIPR1L2Q4G1C9 344 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 GCNT6Q5T4J0 391 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 ATAD3BQ5T9A4 648 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 RAET1LQ5VY80 246 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 NANOGP8Q6NSW7 305 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 RPTNQ6XPR3 784 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 ZNF836Q6ZNA1 936 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 GGNQ86UU5 652 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 IFNEQ86WN2 208 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 LURAP1LQ8IV03 231 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 ZZZ3Q8IYH5 903 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 ULK2Q8IYT8 1036 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 CLIP4Q8N3C7 705 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 NAXEQ8NCW5 288 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 GPR119Q8TDV5 335 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 SSC4DQ8WTU2 575 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 TSPEARQ8WU66 669 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 LRRC58Q96CX6 371 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 RCN3Q96D15 328 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 RNF145Q96MT1 663 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 SFXN2Q96NB2 322 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 PSMG3-AS1Q96PY0 264 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 TREX2Q9BQ50 279 aaPredicted RBP6.31□□□□□ -1.4
SMG6-209ENST00000571442 TUBA1CQ9BQE3 449 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 PRDM14Q9GZV8 571 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 HOXD1Q9GZZ0 328 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 PIF1Q9H611 641 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 KAT8Q9H7Z6 458 aaKnown RBP6.31□□□□□ -1.4
SMG6-209ENST00000571442 NANOGQ9H9S0 305 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 A4GALTQ9NPC4 353 aa6.31□□□□□ -1.4
SMG6-209ENST00000571442 DNAJB12Q9NXW2 375 aaKnown RBP6.31□□□□□ -1.4
SMG6-209ENST00000571442 ALKBH4Q9NXW9 302 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms