RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 KRCC1Q9NPI7 259 aaPredicted RBP14.37□□□□□ -0.11
SMG6-207ENST00000570756 TEX10Q9NXF1 929 aaPredicted RBP14.37□□□□□ -0.11
SMG6-207ENST00000570756 TRAV1-2A0A0B4J238 106 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 FAM183AA6NL82 134 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 MCRIP1C9JLW8 97 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 NUPL2O15504 423 aaKnown RBP14.36□□□□□ -0.11
SMG6-207ENST00000570756 SC5DO75845 299 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 LPLP06858 475 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 CTSAP10619 480 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 SNRPBP14678 240 aaKnown RBP14.36□□□□□ -0.11
SMG6-207ENST00000570756 S100A11P31949 105 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 HTR4Q13639 388 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 STK11Q15831 433 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 KCNA10Q16322 511 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 ACSM3Q53FZ2 586 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 CLVS2Q5SYC1 327 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 SFRP4Q6FHJ7 346 aaPredicted RBP14.36□□□□□ -0.11
SMG6-207ENST00000570756 TMEM173Q86WV6 379 aaPredicted RBP14.36□□□□□ -0.11
SMG6-207ENST00000570756 CFAP206Q8IYR0 622 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 EIF4E3Q8N5X7 224 aaKnown RBP14.36□□□□□ -0.11
SMG6-207ENST00000570756 TMEM99Q8N816 258 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 CASD1Q96PB1 797 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 F2RL3Q96RI0 385 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 TIMP4Q99727 224 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 ARHGDIGQ99819 225 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 MS4A8Q9BY19 250 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 RHBGQ9H310 441 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 FN3KQ9H479 309 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 GPN1Q9HCN4 374 aaPredicted RBP14.36□□□□□ -0.11
SMG6-207ENST00000570756 CA5BQ9Y2D0 317 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 PRELID3BQ9Y3B1 194 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 YIPF1Q9Y548 306 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 SEPT4O43236 478 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 SERPINA3P01011 423 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 GALTP07902 379 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 IFNGR1P15260 489 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 TYRP1P17643 537 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 AHRP35869 848 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 KIAA1024LP59773 190 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 FLI1Q01543 452 aaPredicted RBP14.36□□□□□ -0.11
SMG6-207ENST00000570756 LCTLQ6UWM7 567 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 FAM129CQ86XR2 697 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 NRMQ8IXM6 262 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 TTLQ8NG68 377 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 THAP4Q8WY91 577 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 ELP4Q96EB1 424 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 CMTM3Q96MX0 182 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 OR10A4Q9H209 315 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 KLHL28Q9NXS3 571 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 PIPOXQ9P0Z9 390 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 HCSTQ9UBK5 93 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 FLVCR2Q9UPI3 526 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 RCE1Q9Y256 329 aa14.36□□□□□ -0.11
SMG6-207ENST00000570756 RANBP2P49792 3224 aaKnown RBP14.36□□□□□ -0.11
SMG6-207ENST00000570756 FLRT2O43155 660 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 CREBL2O60519 120 aaPredicted RBP14.35□□□□□ -0.11
SMG6-207ENST00000570756 EPXP11678 715 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 ATF1P18846 271 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 TBXA2RP21731 343 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 PRKAG1P54619 331 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 MAZP56270 477 aaKnown RBP14.35□□□□□ -0.11
SMG6-207ENST00000570756 PSMA6P60900 246 aaKnown RBP14.35□□□□□ -0.11
SMG6-207ENST00000570756 HLXQ14774 488 aaPredicted RBP14.35□□□□□ -0.11
SMG6-207ENST00000570756 SLC25A25Q6KCM7 469 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 ALKAL2Q6UX46 152 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 GLDNQ6ZMI3 551 aaPredicted RBP14.35□□□□□ -0.11
SMG6-207ENST00000570756 PDZD9Q8IXQ8 264 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 CHST14Q8NCH0 376 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 CLRN3Q8NCR9 226 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 KAT2AQ92830 837 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 SAMD8Q96LT4 415 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 AMDHD1Q96NU7 426 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 GLIPR2Q9H4G4 154 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 ELAC1Q9H777 363 aaKnown RBP14.35□□□□□ -0.11
SMG6-207ENST00000570756 AUNIPQ9H7T9 357 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 PLEKHA1Q9HB21 404 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 HRASLSQ9HDD0 168 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 MED11Q9P086 117 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 CFAP97Q9P2B7 532 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 ZNF69Q9UC07 566 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 IL20RAQ9UHF4 553 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 A0A1B0GW55 424 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 KLF4O43474 513 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 GALR3O60755 368 aaPredicted RBP14.35□□□□□ -0.11
SMG6-207ENST00000570756 ASGR2P07307 311 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 DUX4L2P0CJ85 424 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 DUX4L3P0CJ86 424 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 DUX4L4P0CJ87 422 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 DUX4L5P0CJ88 424 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 DUX4L6P0CJ89 424 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 DUX4L7P0CJ90 424 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 PPP3CBP16298 524 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 SDHBP21912 280 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 NTSP30990 170 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 GATMP50440 423 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 NRG3P56975 720 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 E2F1Q01094 437 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 FUT5Q11128 374 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 UBE2NLQ5JXB2 153 aa14.35□□□□□ -0.11
SMG6-207ENST00000570756 MBOAT2Q6ZWT7 520 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms