RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 AP4B1Q9Y6B7 739 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 HEATR5AQ86XA9 2040 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 CENPVL1A0A0U1RR11 272 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 CCDC154A6NI56 674 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 H3BNH8 94 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 UBDO15205 165 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 KIAA0513O60268 411 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 FCMRO60667 390 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 STX11O75558 287 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 AGR2O95994 175 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 IL18BPO95998 194 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 LINGO3P0C6S8 592 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 SSTR2P30874 369 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 OPRM1P35372 400 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 CHI3L1P36222 383 aaPredicted RBP11.74□□□□□ -0.53
CNOT1-220ENST00000569916 P2RX1P51575 399 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF41P51814 821 aaPredicted RBP11.74□□□□□ -0.53
CNOT1-220ENST00000569916 LRRC74AQ0VAA2 488 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 GPR68Q15743 365 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF141Q15928 474 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 NDUFAF6Q330K2 333 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 PDZK1Q5T2W1 519 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 C16orf62Q7Z3J2 963 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 GCNT2Q8N0V5 402 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 METTL25Q8N6Q8 603 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF614Q8N883 585 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 OR9I1Q8NGQ6 314 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 POC1BQ8TC44 478 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 DYDC1Q8WWB3 177 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 SMPDL3BQ92485 455 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 FIG4Q92562 907 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 INTS12Q96CB8 462 aaKnown RBP11.74□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF845Q96IR2 970 aaPredicted RBP11.74□□□□□ -0.53
CNOT1-220ENST00000569916 RNF145Q96MT1 663 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 EBF4Q9BQW3 602 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 SFXN3Q9BWM7 321 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 PINK1Q9BXM7 581 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 INTS9Q9NV88 658 aaKnown RBP11.74□□□□□ -0.53
CNOT1-220ENST00000569916 JKAMPQ9P055 326 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 MKLN1Q9UL63 735 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 CARD8Q9Y2G2 431 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 L3MBTL1Q9Y468 752 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 LRBAP50851 2863 aa11.74□□□□□ -0.53
CNOT1-220ENST00000569916 PRAMEF27A3QJZ7 478 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 SLC22A20A6NK97 555 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 SYT5O00445 386 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 POLR3GO15318 223 aaPredicted RBP11.73□□□□□ -0.53
CNOT1-220ENST00000569916 UGT2B17O75795 530 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 TGDSO95455 350 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 IL6P05231 212 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 GSNP06396 782 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 GUSBP08236 651 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 UBL4AP11441 157 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 MRPL19P49406 292 aaKnown RBP11.73□□□□□ -0.53
CNOT1-220ENST00000569916 SUMO3P55854 103 aaPredicted RBP11.73□□□□□ -0.53
CNOT1-220ENST00000569916 EEFSECP57772 596 aaKnown RBP11.73□□□□□ -0.53
CNOT1-220ENST00000569916 FOXF1Q12946 379 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 TIGD2Q4W5G0 525 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 ATAD3BQ5T9A4 648 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 TYW3Q6IPR3 259 aaKnown RBP11.73□□□□□ -0.53
CNOT1-220ENST00000569916 DNAJC14Q6Y2X3 702 aaPredicted RBP11.73□□□□□ -0.53
CNOT1-220ENST00000569916 CHMP1BQ7LBR1 199 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 P4HA3Q7Z4N8 544 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 RNF130Q86XS8 419 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 TRIML2Q8N7C3 387 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 XAGE5Q8WWM1 108 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 RNASE6Q93091 150 aaKnown RBP11.73□□□□□ -0.53
CNOT1-220ENST00000569916 ROPN1LQ96C74 230 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 ADGRG7Q96K78 797 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 SAP130Q9H0E3 1048 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 ACBD3Q9H3P7 528 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 TCF7L2Q9NQB0 619 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 POLE3Q9NRF9 147 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 SLC6A13Q9NSD5 602 aa11.73□□□□□ -0.53
CNOT1-220ENST00000569916 NOTCH2Q04721 2471 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 PDZD2O15018 2839 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 A0A1W2PNV4 684 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 SERINC4A6NH21 518 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 EEF1E1-BLOC1S5C9J1V9 151 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 GTPBP1O00178 669 aaKnown RBP11.72□□□□□ -0.53
CNOT1-220ENST00000569916 HMGN4O00479 90 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 RFXANKO14593 260 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF264O43296 627 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 EEF1E1O43324 174 aaKnown RBP11.72□□□□□ -0.53
CNOT1-220ENST00000569916 TNFSF13O75888 250 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 IL11P20809 199 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 UQCRC1P31930 480 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 IDH3AP50213 366 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 POLR2JP52435 117 aaKnown RBP11.72□□□□□ -0.53
CNOT1-220ENST00000569916 RPS3AP61247 264 aaKnown RBP11.72□□□□□ -0.53
CNOT1-220ENST00000569916 RAC1P63000 192 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 TLE4Q04727 773 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 SKP2Q13309 424 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 SNTB1Q13884 538 aaKnown RBP11.72□□□□□ -0.53
CNOT1-220ENST00000569916 FGFBP1Q14512 234 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 PON3Q15166 354 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 TOMM34Q15785 309 aaPredicted RBP11.72□□□□□ -0.53
CNOT1-220ENST00000569916 MAPK14Q16539 360 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms